Triplophysa dalaica: 130434755
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Entry
130434755 CDS
T09616
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130434755 (hmbox1b)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130434755 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
DUF494
HTH_37
HTH_24
Motif
Other DBs
NCBI-GeneID:
130434755
NCBI-ProteinID:
XP_056621055
LinkDB
All DBs
Position
13:21877718..21885300
Genome browser
AA seq
462 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEILHALDTLERLDREHGDKFGRRGPADTNAN
NSTTSSTTPTSNTANCAPMATSSTTSTATQTQFHGNLSPSPNNSYAISPPTVLPSPVSLV
AIAQNGRDALAAMPNGKLSPNRYPVNSAAAVRSYGLEASEEDLDVDDKVEELMRRDSTLV
KDEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLERTTPG
ATLNMRPAPVALDEMEWRQTPPPINSATGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ENHGIDVQSPGGHSNSDDVDANDYSEQGCDVSYFEKRGVNRPFGYYRLEPTSPTQDDAAN
HTDHQDPISLAVEMAAVNHSILALSQPGSVAGEIKTEAIDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacaccgatgagcctcggttcaccatcgaacagatcgacctgctccagaga
ctgcggcgtacaggcatgaccaaacccgagatcctgcacgccctggacaccctggagcga
ctcgaccgcgagcacggagataaattcggccggcgcggcccagcggacactaacgccaac
aacagtaccacctctagcactacgcccacctcaaacactgctaactgcgcccccatggca
acgtcctccaccacttccacggcaacgcagacgcaattccacggcaacttatcgccatct
cccaacaacagttacgctatttctccacccactgtcttaccctcgccggtctctctggtc
gccatagcgcagaacgggcgggacgctttggcagctatgcccaacgggaagctatctcca
aaccgttaccctgtgaacagcgcggcggctgtgaggtcgtacgggctggaggcgtcagag
gaggacctggatgtagatgacaaagtggaggaactcatgagacgggatagcacgttggtg
aaagatgaaatcaaagcctttctaggcaacagacgcatctcacaggccgtggtggctcag
gtcacaggcattagtcagagtcgaatctctcactggcttctccagcagggttcagacctg
agcgaacagaagaaacgcgctttctaccgctggtaccagctcgagaggaccacacctggt
gccacactaaacatgcggcccgcccctgtggcgttggacgagatggaatggcgtcaaacc
cctcctcctataaactctgccaccggaagcttccgtctgcgcagaggcagtcgattcacc
tggaggaaagaatgtctcgctgtcatggagagttatttcagtgataaccaatatccagat
gaagccaaacgagaggagatcgccaacgcctgcaatgctgtcattcagaaaccaggaaag
aagctgtcagacttagaaagagtcacgtctctaaaagtctacaactggttcgccaaccgc
cgcaaggagatcaagaggcgggctaatatcgggtcttttttccaagaagccacaatcctg
gagaaccacgggatagacgtgcagagtcccggtggacattccaacagcgacgacgtcgac
gccaacgactacagcgaacagggttgtgatgtttcctattttgaaaagagaggcgtgaac
cggcccttcggttactaccggctggagccaacgtcaccaacacaggatgatgctgccaat
cacacagaccaccaggaccccatctctctcgccgtggagatggcagccgtcaatcacagc
atcctcgccctatcccagcctggaagcgtggcgggtgaaatcaagacagaggcaatcgac
gacgactga
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