Triplophysa dalaica: 130434810
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Entry
130434810 CDS
T09616
Symbol
pkd1l2a
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130434810 (pkd1l2a)
04091 Lectins [BR:
tdw04091
]
130434810 (pkd1l2a)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130434810 (pkd1l2a)
Lectins [BR:
tdw04091
]
C-Type lectins
Others
130434810 (pkd1l2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
Lectin_C
SUEL_Lectin
Ion_trans
GPS
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130434810
NCBI-ProteinID:
XP_056621432
LinkDB
All DBs
Position
1:7137197..7157483
Genome browser
AA seq
2448 aa
AA seq
DB search
MDYHNVLCLTLIFHAVLVWSNGEDGLTCPEHQQAFESSCYEFVGLQRSFLSAQAWCERGG
GHLAFIQNDETQQFLQKHLQTEQSWWIGLAPSSVNLTLDPAATDVLLSWLDGSDVSFSSW
LSEPAQNASCGCIMRDSGFQWETTTNCSQELYFICEFESGRSLACADHNATLQCGSGQVI
EIDDSFYGRKTLHYCRSGRSPTNASPQEEECSWVDIVDTVSGNCHGLQVCQAAIDISSFG
EPCPTFGSYLSVEYHCKNALHLLMSKLAAVFDNVTITVKWLLHPFQGNLTCTLSAGDGHV
IENYSPDKMENVVHKYNSAGLYTVTVECSTSEWHVTAQKSILIQEPLGEFGTVQCYSLNQ
STDHTNCRALYNNPLNIEVQLDAGTNVTYKIQHGHKKLNSSSALKGLSRHNITLSPEAQL
QMGPGCHQLTIAALNEVTRTDRSTSLNVCLMEPLEDLWAEVEFKQEKCPAYDLHVNVSLA
RGAPVLLHFLLSGTNHTFSEKHEMESGGPQTFRISNTVPGGFNVAIRATNNFSVLETDAG
NVTVYCHNETNLKIIADPEVPVIGSSSVKLYVNGLDDENTIWKCNETCPCTTEVKGSTYE
IPEACLPPVYSFSLYTAFTKSNGYQQSTTRCITVVPGNDIQLHINCSNCDPVNIADAVTL
QVECEDCQKVVWYIESTEDFTGLLSDCHSEAVQRPLIKQAEDVTSLTIDSEGLQKANHDI
TVVVYAVKDNLSGSAKYIVPVTSTSISETDSLPLTPVPPSILNPPSCTISPVMGDVLSPF
NITCPVDPFFCEAGPCTYCFKTDRGKILYCGVEHAVESLYLPLGDERNNYILTVEITVTN
AVGLAVNSTVTTWVNHTVKPTIEDLQVLVSSQVSQLQQQGRFTGAALAQMFTSVSNRLND
ALPDLQDKHFKKELRQQMLQSMSVAISMEPLKNPAEVQMSADAVVGLTTQGDELTDTAQL
QASSVLTNLSQSLVDLSHSAEEFSGQVLQAAMPIIDGVSNILKVSSSKDEQSEISGHLMN
TVGNVQSALLAGKEVNQEPTILSTSVMGLYVNRLSVDGLQKQSFNIENSNSASFLLPSLG
ANVLSADEPVDVRMMSYKINPFSWCESEQISGSMGSLSLTKKNGSVIPVSNLTEEIEILL
PRTEMENVNQTLLDLGNYSTVVINVTTPNISLVLRFEPSEDTSLHLLLGFQDYPNDTNYD
ALTQLPRDGKSEEERYTWVINPTEMPIEVGVYYLLVRPVVDAGVNFTNASVFVTTIAAQC
LYWDEMNGNWSRDGCRVGPRTTASVTQCLCTHLTFFGSSFFVMPNMVDVSRTAELFANFV
NNPVVVCFVGAIFLVYLVVVVWARRKDIEDVVKVKVTVLEDNDPLAEYRYLLSINTGQRR
GASTSSQVTVILQGAEGESEAHHLTDPDKPVFERGGLDMFLLTTPYSLGELESIRLWHDN
SGDYPAWYVNKVMVQDLETGQKWHFLCNSWLAIDMGECTLDKVFLVATEMDLKRFSNLFF
MKTAKDFRDGHIWFSVISRPPSSNFTRVQRVSCCFSLLLCTMLTSIMFWGIPTDPSEQTM
DLGQIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNARPRERTTEPPTIQRSKIDPAKQGK
TGRVSPNQPPSPDNNHKEITPDTVIKDIKRIAQSLHKVMRRPVPKIEVDPGKTDINTLLS
LVEEVIRQHNRVGNEFYTDSSKKEQRLAVSLRCVNLQETSFCESPERSEKSIIYNQYLYK
QLQNVERELRLLRPSSFSKPDSYSRAVLQVQGMKNLLEPQVSCSGGQHTRSSSPTEGSGP
DKKKCCQKGLPWWFVFVGWFLVAATSAVSAYFTMMYGLTYGKERSIGWLVSMVVSFFESL
FITQPLKVLGFAVFFALVLKNVDQEEYGDISIDGALPSTDDPDAVRIARRNSTCSFYQPP
PPTDIEKMRNNMIKEQKAFALIREILIYVGFLWMLLLVAYSQRDPNAYYLTQHIRQSFSN
GISESMEQKDIFNWGKTSLLNNLFGQYPGFITDGNSKLVGNARLRQVRVRKGSCKIAKPI
QHSDVDCNGPYSWDTEDMGSYAPGWIQLNVNDSKTLLQPWQYQSQAKLRSNPVWGSVALY
KGGGFVVDLGSDQQNASRLLQYLFNNSWLDVYTRAVFVEFTVYNANVNLFCIVTLMFETT
GVGAFQDRSEVQSVHLYQSTGGFHVFIMASEAIYFLFILYYMFVQGKLMRQQKWAFFRSK
WNLLELAIIILSWSALSVFVKRTILGNRDIEYYQNNKDLFVSFSETAAADAVLGYLIAFL
VLLATIKLWHLLRLNPKLHMITSTLQRAWADISGFIVVMTIMFLAYSIACNLMYGWRLYS
YRSLLQAGQTIIRLQLGIFNYDEVLDYNPILGACLFGSCIIFMTFVVLNLFISVILVAFS
EEQLHPTPSEEEEIVDLMLTKIYSLFGIKCKKKQIDNDDALTKASVIS
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atggactatcacaacgttctgtgtcttacactgatttttcatgccgttttagtctggagt
aatggtgaagacggtctaacctgcccagaacaccagcaggcttttgagagctcctgctat
gaatttgtgggtctgcagcgtagttttctcagcgctcaagcttggtgtgagaggggcggc
gggcacctggccttcatccagaatgacgagacccagcagtttctccagaaacacctgcag
acagaacaaagctggtggatcggactagcgccttcttctgtcaatctcactttggatcct
gcagccacagacgttctcttatcctggctggatggctcggatgtcagtttttccagctgg
ctcagtgagcctgcacagaacgcgagctgtggatgcatcatgagagattctggatttcag
tgggagaccaccactaactgcagccaggagctttattttatctgcgaatttgagtctggg
cgttcattagcctgcgccgatcataacgctacacttcaatgtggctctggtcaagtgata
gagattgacgacagtttctacgggaggaaaacgctgcattactgcaggagcggtcgcagt
ccgaccaatgcatctccacaggaggaggagtgcagctgggtggacattgtagatacggtc
tcagggaactgccacgggctgcaggtgtgccaggctgctattgatatctcatcctttgga
gagccgtgtccgacttttggaagctatttgtcagtggaatatcattgcaaaaatgctctt
catctgttgatgagcaaactggcagcagtttttgacaatgtcacaattacagtgaagtgg
ctgttacacccttttcaaggcaacctcacgtgcacattgagtgcaggtgatgggcacgtt
atagagaattacagtccagataagatggagaatgtggtccataagtacaacagcgctgga
ctgtacacggtcacggtcgagtgtagtaccagtgaatggcacgtgaccgcccagaagagc
atcctcatccaggaaccacttggagagtttgggaccgtgcagtgctacagcctgaatcaa
tccacagaccatacaaactgcagagctctttataataacccactgaacattgaagtgcag
ttagatgcaggaacaaacgtcacctacaaaattcaacatggacacaagaagctgaattcc
tcatctgctctcaaagggctttcacgtcacaacataaccttatctccagaagcccagctc
cagatgggaccaggctgtcaccagctcaccatagcggctctcaatgaggtcacgcgcaca
gatcgatccaccagcctgaatgtgtgcttaatggagccgttggaggacctctgggcagaa
gtggaattcaagcaagaaaagtgtccggcttatgacctgcatgtcaacgtttctctggct
cggggggctccagtgctgctgcatttcctgttgtctggaaccaatcacaccttttcagag
aagcatgagatggaatccggaggtccacagactttccgtatctcaaacacagtaccaggc
ggattcaatgttgcgatcagagcaacaaataacttctcggttttggaaacagatgctgga
aacgtaacagtttattgccacaatgaaacgaatctgaagataattgctgatccagaggtt
ccagtcattggctctagtagtgtgaagttatatgtgaatggattagatgatgaaaacact
atctggaaatgtaacgagacgtgtccctgtaccactgaagtgaaaggcagcacatatgag
ataccggaagcatgtctgccacctgtctacagtttctcactatatactgcatttaccaaa
tcaaacggttaccaacaaagcacaactagatgcatcaccgtcgttcctgggaatgatata
cagctacatataaactgctcaaactgcgatccagtcaatattgcagacgctgttacactg
caggtggaatgtgaagactgtcaaaaagttgtgtggtacattgagagcacagaggatttt
actggtttactaagcgactgtcactcagaggcagtgcaaagaccattgataaagcaggca
gaggatgttacctctcttactatagacagcgaaggtctgcagaaagcaaaccatgatatc
acagtggtggtttatgctgtcaaagacaacttatctggatctgctaaatacattgttcca
gtaaccagtacgtccattagtgagacagattctcttccactgactcctgtgcctccatcc
atcttaaatccgccctcttgtaccattagccctgtaatgggtgatgttctctcacccttt
aatatcacctgtcctgtggatccatttttctgtgaagctgggccctgtacatactgcttt
aaaacagacagaggaaaaattttatactgtggtgtcgagcatgcggtagagtcgctttat
cttcctctaggggatgaacgtaataactacatcctgacagtggaaatcactgttacaaat
gctgtagggcttgctgtcaactctactgtaactacatgggtgaatcatacagttaagccc
accattgaagatcttcaggtgcttgtttccagccaggtatctcagctgcagcagcagggt
cgattcacaggtgcagcgctggcacaaatgttcacgtctgtatcaaacagactgaacgat
gcgttgcctgacctacaggataaacatttcaaaaaagagctgagacaacaaatgttgcaa
agcatgagtgttgccataagcatggaacccctgaagaacccagcagaggttcagatgagt
gctgatgctgtcgtaggcctcacaacacaaggagacgagttaacagacactgctcagcta
caggctagttcggttctaacaaatctcagtcagtctctggtcgatctgagccattctgct
gaggaattctctgggcaggtgctacaagccgccatgccgattatcgatggtgtcagtaac
atccttaaagtttcttcaagcaaagatgagcagagtgagatctcaggtcatttaatgaac
acggtgggcaatgttcagagtgccttgctggctgggaaagaggtcaaccaggagcccacc
attctgagcacttcagtgatgggtttatatgtcaacagattgtccgtagatggacttcag
aaacaatcttttaacattgagaacagcaactccgccagttttttgctcccatctctaggt
gctaatgttctatctgcagatgaaccggtagatgttcggatgatgagttataagataaat
ccgttctcctggtgtgagagcgagcagatcagtggatccatggggtctctctctcttaca
aaaaagaacggttctgtgattccggtgtcaaacctcactgaggagattgagattctttta
ccaagaacagagatggagaatgttaaccaaactcttctagatctgggaaactacagcact
gtggtcatcaatgtgaccacaccaaacatatctctggttttgaggtttgaaccttcagag
gacacatctctgcacctgctcctgggttttcaggattacccaaacgacacgaattatgat
gctctgactcagctgcctcgagacgggaaatctgaagaggagaggtacacatgggtgatt
aaccctacggaaatgcccatagaagtgggtgtttactacctactagtgaggcctgtagtt
gacgcaggggtgaatttcacaaacgcctcggttttcgtcacaaccattgctgctcaatgt
ttgtactgggatgagatgaacggcaactggagtcgtgatggctgtagggttggtcctcgc
actacagcatcggttactcagtgcctgtgcacccatttgacattttttgggagctcattc
ttcgtcatgcccaacatggtcgatgtgtctcgcacggctgaactcttcgccaactttgta
aacaacccagtggtggtgtgtttcgtcggagccatctttctggtgtacctggttgtcgtg
gtgtgggcacggaggaaggacattgaggatgttgtgaaggtgaaagtcactgtacttgaa
gacaatgatcccttggcggaatatcgttacctgttaagcatcaacactgggcaacgccgt
ggagcctccacttcctctcaggtgacagtgattctgcagggtgcagaaggtgaaagtgaa
gctcatcatttgactgatcctgataagccagtgtttgaaagaggtgggctggatatgttc
ttgttgaccacaccgtactcactgggagaacttgagagcatcagactgtggcacgacaac
tcaggggattatcctgcttggtatgtgaataaggtcatggtacaggacctggagactgga
cagaagtggcactttctgtgcaactcttggttggctattgacatgggagagtgcacgttg
gacaaagtctttctcgtagcgacagagatggacttgaaaaggttcagcaatctgttcttc
atgaagactgcaaaagacttccgtgatggtcacatctggttctctgtgatcagtcgtcca
ccgagcagtaacttcaccagagtgcagcgtgtctcctgctgtttctcactgctgctctgt
acaatgttgaccagtatcatgttctggggtatcccaacagacccctccgagcagaccatg
gatctgggtcagattgagttcacctggcagcaggtcatgattggaatccagagttcaatc
atcatgtttcccatcaacctcctcatcgtgagcatcttcagaaacgctcgcccaagagag
cgaacgacggaaccgcctacgatacaacggtcaaagatagatccggctaagcagggtaaa
actggacgtgtgtccccgaatcagccaccctctccagacaataatcacaaggaaatcact
ccagacactgtaataaaggacattaaacggatcgcacagtccctccataaggtcatgaga
agacccgttccaaagatagaagtggaccctggtaaaacagatatcaacactctactgtca
ctggttgaagaggtaatacgtcaacacaatcgagtcggtaatgagttttacaccgactct
tctaaaaaggagcaaaggcttgctgtttctctgagatgtgtgaatctgcaagagaccagt
ttttgtgagagccccgagcgaagtgaaaaaagcatcatctacaaccaatatctctacaaa
caactacaaaacgtggagagagaattgagactgctcaggccttcatctttctcgaagccg
gacagttacagccgggctgtattgcaggtgcagggcatgaagaacttacttgaacctcaa
gtctcctgttccggcggtcagcacacacgcagctccagcccaacagagggcagcggtcca
gacaaaaaaaagtgctgccagaaaggcttgccctggtggtttgtgtttgtgggttggttt
ctggtggcggccaccagcgccgtttcagcgtatttcactatgatgtacggcctgacctat
gggaaggagcgatccatcggctggctggtttctatggtggtgtctttctttgaaagcctc
ttcatcacgcagcctttaaaagtacttggatttgctgtcttttttgctttggtcctcaaa
aatgttgaccaagaagagtatggagacatttccatagatggagctttgcccagcacagat
gatcctgatgcggtcagaatagcccggagaaacagtacatgtagtttctatcagcctcct
ccgcccactgacatcgaaaagatgagaaacaacatgatcaaagaacagaaagctttcgct
ctcatcagagaaattctaatttatgtcggcttcctgtggatgctcctcttggtggcgtac
agtcagcgagatccaaacgcgtactatctcactcagcacattcggcagagcttcagcaat
ggcatttcagagagcatggagcagaaagatatattcaactgggggaaaacatccttactg
aataatctgtttggccaatatccaggcttcattactgatggaaactcaaaacttgttggc
aacgctcgtctccgtcaggtcagggtgaggaaaggctcttgtaagattgctaaaccgatt
cagcattccgatgttgactgcaacgggccatattcttgggacacagaggacatgggctcc
tacgcaccaggctggatccagttgaatgtgaatgattcaaagactcttttacaaccttgg
cagtatcaaagtcaagccaaactcagatcaaacccagtttgggggagcgtggccctttac
aagggtggaggatttgtggtggacctgggctcagatcagcagaacgcaagcagactcctt
cagtatctttttaacaactcttggctggacgtgtatacgcgggcagtctttgtcgagttc
acagtatacaacgcaaatgtaaacctcttctgcattgtgactctcatgttcgaaaccaca
ggagtgggtgcattccaagatcgaagtgaggtacagagcgtccatctctaccagtctacg
ggtggctttcatgtgtttataatggcatcagaggccatctatttcctcttcatcctttac
tacatgtttgtgcagggcaaactaatgagacagcagaaatgggcgtttttcagaagcaag
tggaatcttttagagttggccattataattttaagttggagtgcattgtcggtttttgtc
aagaggacgatattgggtaaccgggacattgagtactaccaaaataacaaagacttgttt
gtgagtttttcagagaccgccgcagcagatgctgtgttgggttacctgatagccttcttg
gttctgctcgcaaccatcaagctgtggcatttgctcagactcaaccccaaactccacatg
atcacctccacactgcaacgggcatgggccgatatctcgggtttcattgtggtcatgacc
atcatgtttctggcctattccattgcttgtaatttaatgtatggatggaggctctactcg
tacagatctctgctacaggccggtcaaacaattatacgcctacagctggggatcttcaac
tatgatgaggttttggattacaatccaattctgggtgcttgcctgttcggatcctgcatt
atcttcatgacgtttgtagttctgaatctcttcatatctgtcatcttggtggcgttcagc
gaagagcagcttcaccccacaccctctgaagaggaggaaatcgtagacctgatgttgacg
aagatctacagcctttttggaatcaaatgcaagaaaaagcaaatcgacaacgatgacgcc
ttgaccaaagcttcggttatatcataa
DBGET
integrated database retrieval system
