Triplophysa dalaica: 130434823
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Entry
130434823 CDS
T09616
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130434823 (si:dkey-183n20.15)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130434823 (si:dkey-183n20.15)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130434823 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
DUF1232
Cmr2_Zn-bd
TRAF3_RING
Prok-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130434823
NCBI-ProteinID:
XP_056621155
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All DBs
Position
13:complement(12398437..12401320)
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AA seq
234 aa
AA seq
DB search
MERELHTKNMVTSHSFHNRSHHLSQIKSQGHMNREDLHKLWLPTANREPQCPVCLQTASY
PVETNCGHLFCAPCLISYWKHGSWLDAINCPLCRQRVNKMCHLFGDNRADREEREILRQI
KGYNKRNSGAARQVKDYLCDAPLFMLLLVRRLGNMSGLVWLFLLRVAVCGFGAAMSLASP
LETLPGPLGGVLGMLDDFVVVFLILICIININQQMGPQRTRTQTFTHGVLTDAL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggaaagggaattgcatacaaaaaacatggttaccagtcacagcttccacaacaggtcc
catcatctctcgcaaataaagagtcaaggtcacatgaacagagaggatttgcacaagctg
tggttaccaactgccaacagggaaccccagtgccccgtgtgtttgcagacagccagctac
cctgtagagaccaactgtgggcatcttttctgtgcaccgtgcctgatatcatattggaaa
catggctcctggttagatgccatcaactgtcctttgtgcagacagagggtgaataaaatg
tgtcatctcttcggggacaatagagctgatcgtgaagaaagggagattttgagacaaatt
aaaggttacaacaaacgtaactctggagcagctcggcaggttaaagattacctttgtgac
gcacctctcttcatgctgttgctggtgcggcggttggggaacatgagtggtcttgtttgg
ttgtttcttttgagggtggctgtctgtggatttggggcagccatgtctctggcatccccc
ttggagaccctcccagggcctttaggcggagtgctgggcatgctggatgattttgtagtg
gttttccttattcttatctgcattattaacattaaccagcagatggggccacagaggaca
agaactcaaacgttcacacatggtgtgttgacagatgcgttgtaa
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