Triplophysa dalaica: 130434932
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Entry
130434932 CDS
T09616
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130434932 (ddx1)
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130434932 (ddx1)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130434932 (ddx1)
Spliceosome [BR:
tdw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130434932 (ddx1)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
130434932 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
130434932
NCBI-ProteinID:
XP_056621318
LinkDB
All DBs
Position
13:15748245..15753565
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AA seq
740 aa
AA seq
DB search
MAAYSELGVMAEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPL
IQIVYETLKDLQEGKKGRGAVKTGGAVFNKWQMNPYDRSPAFAIGPDGMCCQSREFKEWH
GCRSTKAVRKGKYYYEVTCHDQGLCRVGWSTGQASLDLGTDKDGFGFGGTGKKSHNKQFD
SYGEEFTMHDVVGCYIDMDKGQLSFSKNGTDLGLAFEIPPPLKTQPFFASCVLKNAELKF
NFGNEPFKNQPKEGFIALSQAPDGHVVKSSQTGSAKVSEVKSGSNAPRALIIEPSKELAE
QTLNNVNQFKKYVENPKLRDLLIIGGVAAKDQLSVLESGVDIVVGTPGRLDDLISTKKLD
LSQVRFLVLDECDGLLTAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFEVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVKPKIDKLWEKPGKNHIRTDEVHAKDDTRPGAN
SPEMWSEAIKVLKGEYTLRAIKEHNMDQAIIFCRTKIDCDNMEEYFIKHGGGPDKKGHQL
SCVCLHGDRKPNERKNNLEIFKKQEVKFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRADRMGLAISLVAMDKEKVWYHSCPSRGKSCNNTRLKENGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGLYKGHVDILAPTVRELANLER
EAQTSFLKLCYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtactctgaattgggagtgatggctgaaattgctcaggcagtggaagaaatg
gactggctgctgccaacggacattcaggccgaatctatcccactgatcctgggtggaggt
gacgtgcttatggcagctgagactggaagtggaaaaactggagcctttagtattccactc
atccaaatagtttatgagacccttaaagacctccaggagggaaagaagggacgaggtgct
gtaaagacaggaggagcagtgttcaataaatggcagatgaacccttatgaccgaagtcct
gcatttgctattggtcctgatggcatgtgttgccagagcagagaatttaaagagtggcat
ggctgccgttccaccaaagcggtcagaaaagggaaatattattatgaggtgacctgtcac
gatcaagggttgtgcagggtgggctggtccactggccaagcatcactagacttggggacg
gacaaggatggatttgggtttgggggaactgggaagaaatctcacaataagcagtttgat
agttatggagaggagttcactatgcatgacgtcgtcggttgctacatagatatggacaaa
ggtcaattgtcattttccaaaaatggtactgatctgggtctggcatttgagatcccccca
ccgttaaaaactcagcccttctttgcttcctgtgttttaaagaacgctgaacttaaattc
aacttcggtaatgaacctttcaaaaaccaacctaaagaaggctttattgccctgagccag
gctccagatggtcatgtggtcaaatcctcccagacaggcagcgctaaagtgagcgaggtc
aaatccggttccaacgcccctcgagctctgatcattgaaccgtctaaagagctggctgaa
caaactctcaacaatgtcaaccagtttaagaaatatgttgagaacccaaaactaagggat
cttctcattattggaggagtggctgctaaagatcagctctccgttttagaaagtggggtt
gatattgtagttgggactcctggcagactggatgatctcatatccacaaagaaactggat
ttatcccaagtccgcttcctggtgctggatgagtgtgatggactcctcacagctggttac
actgacttcattatgagggtctacaatcagatcccccaggtcacctcagatggcaagaga
ctacaggtgatcgtttgctctgccacgctgcactcgttcgaagtaaagaagctctcagag
aagatcatgcatttccctacatgggtggatctgaaaggagaagattctgtgccggaaacc
gtccatcatgtggtggtgccagtcaaacccaaaatcgacaagctgtgggagaaaccgggc
aagaaccacatcaggactgatgaagttcatgccaaagatgacacacgacctggagccaac
agcccagagatgtggtcagaggccatcaaggttctgaaaggagaatatacgctgagagcc
atcaaagagcataacatggatcaggccatcatcttctgcaggacaaagatcgactgtgac
aatatggaggagtactttatcaaacacggaggaggcccagacaagaaaggacaccagctc
tcttgtgtctgtcttcacggtgacaggaaaccaaatgagcgcaaaaacaacttggagata
ttcaagaaacaggaagtgaagtttctgatttgtaccgatgtggctgctagaggaatagat
atccgcggtgttccgtacgtgataaatgtgactctaccagatgaaaagcaaaactacgtt
catcgcattggaagagtcggcagagcagacaggatgggtctggctatttcactggttgct
atggataaggagaaggtgtggtatcacagttgtcccagcagaggaaaaagctgcaataat
accagactcaaggaaaacggaggatgcacgatctggtataatgaaaaagagttgttgtct
gaaatagaggaacatctaaaatgcactataactcagtgtgaacctgacatcaaagtacct
gtcgatgagtttgatggaaaagtgacttacggccagcgcagggccacagggggtggcctt
tataagggccatgtggatatattggccccaactgtacgagaactagccaacctggagaga
gaggcacagacatccttcctgaaactctgctatctacccaaccagctcttcaaagccttc
taa
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