Triplophysa dalaica: 130435290
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Entry
130435290 CDS
T09616
Symbol
nlrc5
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tdw04054
]
130435290 (nlrc5)
Pattern recognition receptors [BR:
tdw04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130435290 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
AAA_16
AAA_30
Motif
Other DBs
NCBI-GeneID:
130435290
NCBI-ProteinID:
XP_056621773
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All DBs
Position
14:7026605..7044199
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AA seq
1758 aa
AA seq
DB search
MRMERVECVGDVQTVVAQEASAVVDLLCEQDTGVLNRILDLVEPTRQDQLRSLANNRDRV
LAVIEYFKTSDCTTCRQFLRTVLHYCENIPFLLETTLVSIAENTSEANFNHTSDTDTSSP
SHNVKRQRLDYLQSYTDALKCMLLQKHESVIQSVVKDICLDDTWVYLRHRNPNKTKDRIA
HVSPDHQDGEDASSEHKVSVESLLKTSGRLLVLLGQAGSGKTLLVHCLGERWADGAFPSI
HLLFLLEFRQLNLMSRDLSLKELLFLFYPPIEDFKEQTEAVFEFIFSNPEKVCFIFDGYD
EFRSKFKNSEKLDRAIDPNKPMPMPDLLSGLCNHKILPNCTVLVTCRPRDVTDMFGSPGF
VTCELMGFDRLGVKEYAEQYFHKKGDELKQKAVNLLMDNRHLLSMCHVPGLCHICCVCMD
YLFSSVGDHGSPQLPISLTQIYIQILSAFLSRSSGSQMSGIPMLQRYKTKIIEMSQLALS
GLEKSTIVFMDTEVSPELQDFGVRTGILSRVKLTREDGSSGYGFTFMHLTMQEFLAAINL
MTSQIITESQLKKKLNLKTRWTTKTDPKSVFTDSLHLYVCGLAAEACTLSLVQLKGTDGA
TTWVQKRQAAVRNFLRSLAGSASQTGPKIVELCRCVHETQDTTLARAVGSRPQFELRNIR
LNAVDMEALAFVTADADQTVCLDFGGCSIDLDCMEILPSFKNVDHLIFRSRKYDDKFAEA
LCGILRELQALRRLDFISGGLTDVGAAKLARALQDCPHITHINVSDNSLRDDGIRDIAEA
VSRLPNTSSILMGKNNISTDGVLMLTEMMTVCPSVQEFYVEGNKEINISFSKSSDTSSEN
MDLNYTKETKKITLKQCNITCAHVASLSTKLNGFITVLDLSKNSLGNKGLKKILDLMPKL
GKIQEINVSKNGVDMDGLVLLVSALCTQRNLRRVDASANGKDKLVLWFDTSTRLLKQPAP
NETGLHLHKKLSLTHSEIQPTYMTKLFRQLVKCENLLDIEFSHLKLSNESLERLMLILPE
MSSLQLLNLSHVDMSTNGALSLVRSLVDCQRVTAVELRHQAEAFIKFVPVKAEAAICRLM
EYKMNRTNVEKLSRILEDCPHLVELDLSHNLLRDEGVKCFVDCLPKLKISSSVSLNGNRM
TQLGALHLVNSMNTCEKVVAVEVSLGVEDQSLILFVQEHVSGKTLRLKECSFEVNHLKKL
VEILKRCPRLLTLELSSSLLHDQGLFSLLDCLAKLSTLQTVKLRNNGLSLEQIEYFLKQL
SCYRQHRDIRIEELCLTGSAVVSLVSNCLNLQLQIEEIRVNRACINFIIDANSSHHSTSA
THSENRDFPMCSLRSISFNDCDTEGHHLTPLIPHMQKCHSLQNLKFSLLKMDRKGVEFFS
VVIPSLVSLKNLSLDMKGTAEDDVAVLVEALAKAQTIETVSLSQLILNDSGAAVFGMALH
NLPHLKSLSLLQCSGWTAARGCDLVRGLVQCLSLAEIRINSLVLNEEGITILAQGLCRMA
SLRKLSLNNIRVETSETFVNGTGILCLLXSFQGLRQMEEIELESWRMGDSGTLELVKHIS
SWTELRNINLSNNSISDQVGEMLVDALSHCRVLQKLQLSKNNLGQACATKLSQVLPLLTQ
ISDLDLSENQFGQNGTLALCEGLDNMKALKRLSLTSIGSSDLVGVASSLKHCPAIEDVSL
SWNECGDTLALKLAEVLPLCTMLKRLDLEANKISTKGAVEIAKCLPSCPSIEVIRLWRNP
VAKDDENLKDQRLNFSSV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggaaagggtggaatgtgtgggggacgttcagactgtggtggcccaggaggct
agtgctgtagtggacttgctctgtgagcaggacaccggtgttctgaatcggattttggat
ttagtggaacctacgagacaggaccagctacgctcactggcaaataatagagatcgtgtt
ttagctgttattgagtacttcaagacttcagactgtaccacgtgtagacagtttcttcgc
actgtattgcactactgtgaaaacattccttttcttcttgaaaccacactggtgtccata
gcagaaaatacatctgaagcaaactttaatcatacaagcgacactgatacttcttcacca
tcccataatgtgaaacgtcaacgactggattatttacagagttacaccgatgcactgaaa
tgcatgctactgcagaagcacgagtcagtcatacaatccgttgtaaaagacatatgtctg
gatgacacgtgggtgtatttaaggcacaggaaccccaacaaaacaaaagataggatagct
catgtgtctcctgaccaccaggacggagaagatgcttcatcggaacataaagtgtcagtt
gagtctcttctgaaaacctctggcagacttcttgtgcttctgggtcaggctggatctgga
aagaccttgttggtgcactgccttggcgaaaggtgggctgatggcgccttcccatccatt
cacttgcttttcctgctggagtttcggcagcttaacctcatgtcaagagatttgtccttg
aaagaactgctgtttctcttctaccctccgatcgaagactttaaggagcaaaccgaagcc
gtgtttgaattcatcttctccaaccctgagaaggtctgcttcatattcgacggctacgat
gagtttcggtccaagtttaagaattcggaaaagcttgatagggccattgacccaaacaaa
cccatgcccatgccagatctcctctctggattgtgcaatcataaaatccttccgaattgc
actgtgttggtcacctgtaggccacgggatgtgacggacatgttcgggagccctggtttc
gtaacatgcgaactgatggggtttgaccgactgggtgtgaaggagtatgctgagcagtac
ttccacaaaaaaggagatgaacttaagcagaaggctgtaaacttgttgatggacaatcgt
catcttctgtcaatgtgtcatgttcctgggctctgtcatatctgctgtgtatgtatggat
tatctgttctccagtgtcggagatcatggtagtccacagctacctatatccctaacccaa
atttacattcagatcttgtctgcatttctgagtcgctccagtgggagtcagatgtctggc
atacctatgctgcaaagatacaaaactaaaattatcgagatgagccagttggctctttca
gggctcgagaaaagcacaatagtttttatggatacagaagtttctccagaactccaggat
tttggcgtcagaactgggatcctgtcccgtgtgaagctgacgcgtgaggatggatcttca
ggatatggtttcacattcatgcaccttactatgcaggagttccttgccgctatcaatctc
atgaccagtcaaatcatcacagagagtcagcttaagaagaaacttaacttgaaaacccgg
tggacaaccaagactgatccaaaatctgtcttcaccgattctctccatctttacgtgtgc
ggtcttgcggctgaggcgtgcacccttagtctggtccagctgaaaggcaccgacggtgcc
acgacttgggtacaaaagcgccaagccgcggtacggaactttttacgctctttagcagga
agtgcaagtcaaactggccccaaaattgttgagctgtgtcgatgtgttcatgagacacaa
gatactacgttggcaagggctgttggttcaagaccccagtttgaactgcgaaatatcaga
ctcaatgctgttgacatggaggctctggcatttgtaacagcagatgcagatcagactgtg
tgtttggactttggtggctgttccattgatcttgattgtatggaaattctgcccagtttt
aagaatgtcgaccatctgatttttcgcagccggaagtacgatgacaagtttgctgaggct
ttgtgcggaatcttgcgtgaacttcaggccttgaggagattagattttatcagtggaggc
cttactgatgttggagcagctaaacttgccagggctttgcaggactgtccacatatcaca
cacattaatgtcagcgataattctttgagagatgatgggataagagatattgcagaagca
gtatccagattacccaacacctcttccattttgatggggaaaaacaacatctccacagat
ggagttctgatgcttactgagatgatgactgtctgcccctctgtacaggaattctacgtt
gagggaaataaggagatcaacatttccttttcaaaaagcagtgatacatcgagtgaaaac
atggacctgaattatacaaaagagacaaagaaaataacgttaaaacagtgtaacatcaca
tgtgctcatgtcgccagcctgtctactaaactcaatggcttcataacggttttagatttg
tccaaaaactcactaggaaacaagggcctgaagaaaattctggaccttatgcctaaactt
ggaaagattcaggagatcaatgtcagcaaaaatggggtagatatggacgggttggtgttg
cttgtttctgctctttgtacgcagaggaacctaaggagagtggatgcaagtgcaaatgga
aaggacaaattggttctttggtttgacacaagcacaagacttttgaaacagccggcccca
aatgaaactgggttacatctgcataaaaaactcagtttaacccatagtgaaatacaacca
acgtacatgaccaaactgtttaggcagctggtcaagtgtgaaaacctactggatatcgag
ttctcccatctaaaactgtcaaatgagtcgctagagaggttgatgttaattcttcctgaa
atgtcatctcttcaactactgaacttaagtcatgttgacatgtctacgaatggggctctg
tcattggtcagatctctggttgactgtcagcgtgtcacagctgtggaactcaggcaccag
gctgaagcatttatcaagtttgttcctgtaaaggcagaggcagccatttgcaggctcatg
gagtataagatgaacagaaccaatgttgagaagctctcgaggatacttgaggattgtcct
catctagtagaactggatttgtcccataaccttctccgggacgagggcgtaaaatgtttt
gtcgattgtttgcctaaactgaagatctccagctcagtgagccttaatggcaacagaatg
acacagttgggggcactgcaccttgtcaactcaatgaacacctgtgagaaagtggttgct
gttgaagtcagccttggagtggaagatcagtctctgattctttttgtgcaagaacacgtc
agcggcaagactctcagactaaaagagtgcagtttcgaagtcaaccacttgaagaagctt
gtggaaatactgaagagatgtcccagactactgactctagaattgtcatccagtttacta
cacgatcaaggcctgttttctttacttgactgcctggccaaactatccacactacaaact
gtcaagttaagaaataatggtttgagtttggagcagattgagtattttttgaaacagctc
agctgctatcggcaacacagagacatcaggattgaagagctgtgtttgacaggaagtgct
gtggtcagtcttgtcagtaactgcttgaatttgcaattacaaattgaggaaatcagggtc
aaccgcgcatgcataaatttcattatagatgccaattccagtcatcattctacttctgca
acgcattctgaaaacagagatttcccgatgtgttctctgagatcaatcagttttaatgac
tgtgatacagaaggacatcatcttactccattaatacctcacatgcagaaatgtcattcc
ttgcagaatttaaaattctctctgctgaaaatggacagaaaaggtgtcgagtttttttct
gtagtcattccatccttagtgagtctaaagaacctcagtcttgatatgaaaggtacagct
gaggatgacgtggcagtacttgtggaagcattagcaaaagctcaaacaattgagaccgtg
agtttgtctcagctgattttgaatgacagcggggctgcagtatttggcatggctcttcac
aatctgccacatcttaagtcactcagtctcctccagtgctctggttggacagcagctcga
gggtgtgacttggtcagaggtctggtgcaatgtctttctctggccgaaatcaggataaac
tctttggttctaaatgaagagggcatcaccatcttggcccaaggcttgtgccgtatggca
tcccttagaaagctcagcttaaacaacataagagtggaaacatctgagacatttgtgaat
ggcactggcatcctctgtctcctgngctcctttcagggacttagacagatggaagagatt
gagttggagagctggcgaatgggagacagtggaactctggaacttgtgaagcatatttct
tcgtggaccgaactaagaaacataaatctgtcaaacaacagtattagcgaccaggttgga
gaaatgctggtggacgctttatcacactgcagggttcttcagaaactacagctctccaaa
aacaatctgggtcaagcttgtgctactaagctgtcacaagtccttcctttactgactcag
atttcagacctcgatttgtcagagaatcagtttggacaaaatgggactttggcactttgt
gaaggtctggacaacatgaaggcactgaaaagactaagcttgacttcgattggaagttca
gacctggttggtgtggcatcatccctcaaacattgtccagccattgaggatgtcagcttg
tcttggaatgaatgtggtgatactctggctctgaaactggctgaggttcttcctctgtgt
acaatgttgaaaagacttgacctggaggccaataaaataagcacaaaaggagccgtggag
attgccaaatgccttccatcatgtccatcaattgaagtgataaggctctggaggaaccca
gttgccaaagacgatgagaatctgaaagatcagagacttaacttctcgtcagtttaa
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