Triplophysa dalaica: 130435297
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Entry
130435297 CDS
T09616
Symbol
afg2b
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1 isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130435297 (afg2b)
Enzymes [BR:
tdw01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
130435297 (afg2b)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
130435297 (afg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_14
AAA_2
TIP49
Rad17
bpMoxR
AAA_33
AAA_7
NTPase_1
Mg_chelatase
nSTAND3
DUF815
AAA_18
CDC48_N
Motif
Other DBs
NCBI-GeneID:
130435297
NCBI-ProteinID:
XP_056621785
LinkDB
All DBs
Position
14:complement(205881..210058)
Genome browser
AA seq
749 aa
AA seq
DB search
MTCVEGLRVVPLDVVDSGTQRCRVGPHLMSRLGLRVGSPVLIGVRQGTCLCVAWPRRDLA
EGYVQISSQCATPDLSTQTFTGLTVDPARIKALSCPKLTCTSVKVFVRSLKHKRHVRELV
QELLSGLYLHRGHMLDLSHADTEIRFVLVEHVNSGAHTAGLVTDRTRVDVSAVQSAKHFQ
NQQRVSDLSLGGLEDVYASLKEMIVFPLRYPASLHRLGLSCPRGLLLIGPPGVGKTLLVR
CVAKDVGARLVTVNGPEVTGSRPGESEENLRRVFDRAREAAEEGSCVLLIDEIDSLCPKR
TSGSSAPENRLVAQLLTLMDGIGSEEGFVIIGVTNQPDALEPALRRPGRFDREVVIGVPL
LLQRRRILECVCRQMPLSADVDLSAVAEMTCGYVGADLSALSREAALLAIRHSQAGVAER
VEMQHFMAALQQVRPSCLRSSIGATDFKPVRWEQIGGLEEVQLKLKQSIEWPMRFPEAFV
RMGISRPRGVLLYGPPGCAKTTLVKAAASSSRCTFLSVSGAEIFSPYVGDSEKTLTQLFV
QARACAPSIVFLDEIDSIVGSRSDGGSSHSVQSQVLSVLLTELDGVGFRSVERRSGSRRM
RQLEGGEQEPDELHQMELQEVCNKDVLIVAATNRADVLDSALLRPGRLDHIIYVPPPDTE
AREAVLRVCTEHVPLHPDVCLRDLAELTERFSGADLQNLCREAALAALCEDGFTVSCVRH
RHFLKTLHSLTPSLTPDQLQQNIHLSVSS
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacctgtgtggaggggctgagagttgtgccgctggatgtggtggactcaggcacgcag
cgctgtcgggtgggtcctcatctgatgtccaggctgggactccgggtgggctctccggtc
ctcatcggggtcaggcaggggacatgtctctgtgtcgcgtggccacggcgagacctcgct
gagggatacgttcagatcagcagccagtgcgccacaccagacctgagcacgcaaacattt
actggactcacggtggacccggcacggatcaaagccctgagctgccccaaactcacctgc
accagcgtgaaggtgttcgtgcggagtctgaaacacaagagacacgtccgtgagcttgta
caggaactgctgagcggcctctacctgcacaggggtcatatgcttgatctgtctcacgca
gacaccgagatcaggtttgttctggttgagcatgttaactcgggcgcacacacagctggt
ttggtgacagacagaacccgtgtggacgtgagcgcggttcagagcgccaaacacttccag
aatcagcagcgggtctcagatctgtcgctggggggtctggaggacgtttatgcatcatta
aaggagatgatcgtctttcctctacgctatcctgcttctttacatcgactcgggctgtcc
tgcccgcgggggctgcttctgatcggaccgcccggtgtgggaaagacattactggtgcgc
tgcgtggcgaaagacgtcggggccaggttagtgaccgtaaatgggcccgaggtcacgggg
tctcgacccggcgagagtgaagagaacctgcggcgggtgttcgatcgggcccgggaggcg
gcagaggagggctcgtgcgttctgctcatcgacgagatcgactctctttgcccgaagcga
acgagcggcagcagcgcgccggagaaccgactggtcgctcagctgctgacattaatggac
ggaatcggcagtgaggagggtttcgtcatcattggagtcacgaaccagccggacgctctg
gagccggcgctcaggagacccggccgcttcgacagagaggtggtcatcggtgtcccgctg
ctgctacagaggcgcaggattctggagtgcgtgtgccggcagatgccgctctccgcggac
gttgatctgagcgctgtcgccgaaatgacctgcggttacgtgggagcggatctgagcgcg
ctcagcagagaggcagcgctgctggccatacgacactcacaggcaggagtcgctgagcgt
gtggagatgcaacacttcatggcggcgctgcaacaggtgcggccctcgtgtctcaggagc
agcataggagcgacagactttaaacctgtccgctgggagcagattggaggactagaggag
gttcaactaaaactcaagcagagtatcgagtggcccatgaggtttcctgaagcattcgtg
cggatgggcatctctcggcccagaggagttctgctgtatggaccgccgggctgtgcgaag
accacgctggtgaaagcggctgcatcttcatctcgctgcacctttctgtcggtcagcggg
gccgagatcttctctccgtatgtgggagactcggagaaaaccctcacacagttatttgtt
caggcacgagcgtgcgcaccctccatcgtgttcctggatgagatcgacagtattgtgggt
tctcgatcagacggcggttcctctcacagcgtgcagtcgcaggttctgtctgttctgctc
accgagttggacggagttggatttcgaagcgtggagagacggagcggcagcagaagaatg
cgtcagttagagggtggagaacaagagccagacgaactgcatcagatggaacttcaggag
gtgtgtaacaaagatgttttgatcgtggctgccactaatcgagcagacgttctggacagc
gctctgctcagacccggccgactcgaccacattatatacgtaccccctccagacactgag
gctcgtgaggcggtcctgcgcgtgtgcactgaacatgttccgctccatcctgacgtgtgt
ttgagggatctagctgaactaacagaacgcttctctggagcggatctacagaacctgtgc
agagaggctgctctcgcggctctgtgtgaggacggtttcactgtttcctgtgtgagacac
cgacacttcctgaagactctacacagtttaactccatctctgactcctgaccaacttcag
cagaacatccacctgtctgtcagttcataa
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