Triplophysa dalaica: 130435405
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Entry
130435405 CDS
T09616
Symbol
rsf1a
Name
(RefSeq) LOW QUALITY PROTEIN: remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130435405 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130435405 (rsf1a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
130435405 (rsf1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
130435405
NCBI-ProteinID:
XP_056621991
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Position
14:1279366..1290543
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AA seq
1281 aa
AA seq
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MAAPSTTAGLPPASSPGFAVLCSFLERYGSALDLPELNFSQLERYLQETSAVPQPLIELH
VKLLRKISKSVTTEKWEKYLIKVCQECNSTWAWELERKSYAEMTVEFKTGILKYLCECQF
DDNLKFKTLVNXEEPDNMRLQPIGRDKEGLMYWFQLDQEQNVRVYAEEQDDLDGSSWRCI
ARTRNDLADALDQLKAQIESSVNQEKLDDPKSPSTEKEGKAGDLKNCGSTLTDSIIPSTK
TNNSMKREASPVAVKQEQDVKDEAEWKDVSKPKSQPIPVIDNRVSTIKTLVKEEAKDCPR
TWNTISVVMPPAPVKPEMQDDKKEPTRVLSSDQQAKIPLKKRELKRSGGYDISNHYSNVN
HNNNNLNSNGSISTSTGGIIVRNPAVLLVKEPHVRSEEKMPAVTLPQELNVTLSRDKQTS
VEPYQKTIREQYVGVGVIKGPLDRKRPLAECDNTSTKDRNGLHGNGSVLTSGTGDADGGR
QSVLVGRSVIKTDNGSVPEDFLSKDVKKVCPDVLESPTVEEKAAVEMKERQTADLKTNVP
AENESEEKSLRSPRKRSSQKSKSKLHRRDESQSTKRSSSAICGVSERGDAGEGETHEDDD
DDDDEVSSELQKEGIRLKIKIPRHRRTPELQHVQSETSNRRSLRRSARICKPSPKVADIQ
DQKPDQTLTAQGEHTEDEEVKIQPAKEVDKKVDVEGPTKSLKGKRRHRRPRWSKTRAKNC
KSKGALDCDEDAGDGKATNDEDNKSERGDNKTESDSDQSNELPPEDACKHCGLTNHPELI
LLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCERLEEQLLNLDTALKKKERAER
RRERLVYVGISVENIITTPDGDAGEDSIQKKKDAKKSNNLGRRSTRTRKSISYRFDDFDE
AIDEAIEEDLQDSQDTGVGGDKHVSTVTNQQRSTVSRETRRSVKPLAPRKRKRRRLNDLD
SDSTVDEEESEDDFQLSDSMEEEEFVVSGDADADADVGSGEGSEWGSTESNAGNPSRSKR
TSRSTHTQKARRSRGRLSSRRRGSSEEEVLNSEEEEEEEEMETEASNEFSESDVDTSRRR
PRRRQNSFVNYYETSESEGSQKASNQKNSSVVHRRRLSSSNSEESVHSQEFEPKSLQRRD
GGQRSESRRDESKQRHQHIKQRRQRSSSEEDENSEEEGETDRSEEDQRPLRRRSNRIETD
DEEEEEGVRQRRQNTRGKISTGKSSKVPENSRSKHTPKGRHNGLVPLQVTAQDDDEDDED
EEEFTGVTDLVNFVFDSEQLS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccgagcaccacagcgggtcttcctccagcttcaagtcccggatttgcggtg
ctttgctcttttctggagcgctacgggtctgctctggatctgcccgagctgaatttctcc
cagctcgagcggtacctacaggaaacctccgcggttcctcagcctctgattgagcttcat
gtcaaactgctgcgtaagatcagcaagtcggtcacgacggagaagtgggagaagtatctt
ataaaggtgtgccaggagtgtaacagcacatgggcttgggaactggagagaaaaagttac
gctgaaatgaccgtcgagtttaagaccgggatcctgaagtacttgtgtgaatgccagttt
gacgacaatctcaagtttaagacgttggttaatngagaagagccggacaacatgcgtctg
cagcccatcggtagagacaaggaaggccttatgtactggtttcagttagaccaagagcag
aatgtgcgtgtttatgccgaagaacaagacgacttggatggatcctcctggagatgcatt
gcaaggacaagaaatgatcttgcagacgcacttgatcagctgaaagcccagattgagtca
tctgtcaaccaagagaagctggatgatcccaaaagcccaagcacagaaaaagaaggtaaa
gctggcgacttgaaaaactgtggatccactttaaccgacagcatcatcccttctacaaaa
actaacaacagcatgaaaagagaagcgtcacccgttgctgttaaacaagagcaagacgtc
aaagatgaagctgaatggaaggatgtttccaaacccaaatcacagccgatcccagttata
gacaacagagtcagcaccattaaaaccctcgtcaaagaagaagccaaggattgtcccaga
acctggaataccatatcagtcgtcatgccccctgcacccgtcaaaccagagatgcaggac
gacaagaaagagcccaccagagtcctcagcagcgatcaacaggctaaaataccactgaag
aagagagagttgaaaagaagcggcggctatgacatcagcaatcactacagcaacgttaat
cacaacaacaataatctgaacagcaacggcagcatcagcaccagcaccggggggataatc
gtacgcaatcccgccgtcttactggtgaaggagccgcacgtgaggagtgaagagaagatg
ccagccgttactctcccacaagagctcaacgtcacattatctcgtgacaagcagacgtcc
gttgagccgtaccaaaagacgatacgagagcaatacgtcggtgttggagttatcaagggt
ccccttgatcgaaagaggcctttggctgaatgtgataacacttccacaaaggacagaaat
ggtcttcatggaaatggcagtgtcttgacgtctggcactggagacgcggatggcggtaga
cagtctgttcttgtggggagatccgtgattaaaacggacaatgggagcgtccccgaggat
ttcttgtctaaagatgttaagaaggtctgcccagacgtgcttgagtctcccacggttgaa
gaaaaagctgccgttgaaatgaaagagaggcagacggcagatctcaaaaccaacgttcca
gccgagaatgaaagcgaagagaagagtttgagaagcccgagaaagaggagctctcaaaag
agcaaatccaagctgcacagaagagatgagagtcaaagcacaaagcgctcctcgtccgcc
atctgcggggtttcagagagaggagacgcaggagaaggtgaaacacacgaagacgatgat
gatgatgatgatgaggtatcgtctgaacttcagaaggaagggattcgactgaagattaag
atcccgcgtcacagacgaactcctgaactccagcacgtccagtctgagaccagcaatcga
cggtccttaaggagatctgctcgcatctgtaaacccagccccaaagtggctgatattcag
gatcaaaaaccagatcaaacactgacggctcaaggcgaacacacggaagacgaagaggtg
aaaattcagcccgcaaaggaggttgacaagaaggtggacgtggaaggacccaccaagtct
ttaaagggcaagcgacgacacagacgccctcgctggtcgaaaacccgtgctaaaaactgc
aaatccaaaggagcgctggactgcgatgaggatgcgggtgatggcaaggccacaaatgat
gaggacaacaaatcagagagaggagacaataagactgagagcgactcggaccagtcgaat
gagcttccgcctgaagatgcttgtaaacactgcggtctcaccaaccacccagagctgatt
ctcctgtgtgactcgtgtgatagcggctatcacacagcctgcctaagacctcctctcatg
atcattccagatggagaatggttctgtcctccctgccagcacaaacttctctgtgagagg
ttagaggaacagctactgaatctggacacggcgctgaagaagaaagagagagctgaaaga
aggcgtgaacggttagtgtatgtgggcatcagtgtggagaacatcatcacaaccccagac
ggtgacgcaggagaggactcgatacagaaaaaaaaagacgcaaagaagagcaacaatctg
ggccgccgatcgaccaggacgaggaaatccatcagttacaggtttgatgactttgacgaa
gccatcgatgaggcgatagaggaagatcttcaagactcgcaggacacaggtgtcggaggt
gataaacatgtgtcgaccgtgacgaatcaacagcgcagcacggtcagccgagaaacccgc
cggtctgtgaagcccctcgcaccacgcaaaagaaaacgccggcgactcaacgacttggac
agtgacagtacggtggacgaggaggagagtgaggacgactttcagctcagtgacagcatg
gaggaggaggagtttgtggtttcgggagatgctgatgctgatgcagacgtcggctctggt
gagggcagtgaatggggcagcactgaaagtaatgctgggaatccatctagatccaaaaga
accagcagaagcacacacactcaaaaagccaggaggagcagaggcagactttccagccga
cggagaggatcctcagaggaggaggtgttaaactcagaagaggaggaggaggaggaagaa
atggagacggaggcatcgaacgagtttagcgagagcgacgtggacacgagcagaagacgt
ccgcggcgcaggcagaactctttcgtcaactactacgaaacgtccgaatcggaggggtca
caaaaggcgtccaatcagaagaactcttctgtggttcaccgtcgacgactgtccagctcc
aacagtgaagagtctgtacattctcaagagtttgagccaaagtctctgcagagaagagac
ggaggacagagaagcgagtccagaagggacgaatccaaacagagacaccaacatataaaa
cagagacggcagagaagctccagtgaggaagatgagaactccgaggaggaaggagaaaca
gaccggtctgaggaagaccagcggcccctccgcaggaggtcaaaccgcatagaaactgat
gatgaagaggaggaggaaggcgtgcggcaaaggaggcagaacacccgaggaaagatctcg
acgggcaagtcctctaaagtcccggagaactccaggtcgaagcacacacccaaaggcagg
cacaatggcctggtccctctgcaggtgacagctcaggatgatgatgaggatgatgaagac
gaggaagagtttaccggagtcacggaccttgttaactttgttttcgacagcgagcagctg
tcctga
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