Triplophysa dalaica: 130435411
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Entry
130435411 CDS
T09616
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130435411 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130435411 (cstf3)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
130435411 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
130435411
NCBI-ProteinID:
XP_056622001
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Position
14:15645334..15660043
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AA seq
716 aa
AA seq
DB search
MSTETAPDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAFEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVH
SIYNRLLEIEDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFMAFKDEYEGKETALLVDRYKFMDLYPCSPCE
LKALGYKDVSRAKYASMIQEAVVTPSAPTQKDEADRKPEYPKPDISQMIPFQPRHLAPPG
LHPVPGGVFPVPPTAVILMKLLPPPGCFSGPFVQVDELIESLRRCVLPETVEAAVELITG
KQFETSSEGNGPLENHAVANKSLKRPNADSDEEEDKGSVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgaaactgctccagaccaggcggcagagtacatcccagagaaggttaagaaa
gcagagaagaaattggaagaaaatccgtatgacctcgacgcttggagcatactgattcga
gaagcacagaatcaacccatagacaaagcaaggaagacatacgagcgacttgtcgcccag
tttcccagttcgggcagattctggaagctattcattgaagctgagatcaaggctaaaaac
tatgacaaggttgaaaagttatttcagaggtgcttaatgaaggttctgcacattgacctg
tggaagtgctacctctcctacgtccgtgaaaccaaagggaaactgcccagctataaggaa
aagatggcgcaggcgtatgattttgctttggataagatcggtatggagatcatgtcctat
cagatttgggtggattacatcaatttcctcaagggagttgaggccgtggggtcatacgca
gagaatcagcgcatcacggccgtcagacgtgtgtaccagaggggctgtgtcaatcccatg
attaatattgagcagctctggagggattacagtaaatatgaagagggaataaatgtgcac
ttggccaaaaagatgattgaagatcggagcagagactacatgaacgccaggagagtcgcg
aaggagtacgagacagtgatgaagggtctagaccggaacgccccctcagtgccgcctcag
aactccccacaggaggcccagcaggtggagatgtggaagaaatacatccaatgggaaaag
agcaacccgctgcggactgaagaccagaccctcatcactaaaagagttatgtttgccttt
gagcagtgccttttggtacttggacatcatcctgacatctggtacgaggctgcccagtac
ctggaacaatccagtaaacttctggcagaaaaaggggacatgaataatgcaaagctgttc
agtgacgaggcagcaaacatttacgagcgtgctataggaactcttcttaagaagaacatg
cttctttatttctcttttgcagactatgaagagagtcgtatgaagcacgaaaaggttcat
agtatatacaaccgcctcttggagatagaagatatcgaccctaccctggtctacattcag
tacatgaagttcgccagaagagctgaaggcatcaagtctggccgatccatctttaagaaa
gccagagaagaccttcggacgcggcatcatgtgtacgtcaccgctgctttaatggaatac
tactgcagcaaggacaaatctgtggcctttaagatatttgagcttggactgaagaaatac
ggcgacattcctgaatacattttagcctacatcgattacctctctcacttaaacgaggac
aacaacaccagagtcctgtttgagagagtgctcacgtctggaagtctttcccctgagaag
tctggggaaatttgggcacgcttcttggcctttgagagcaacatcggggacttggccagt
attctgaaggtggagcgaagacgtttcatggccttcaaggatgaatatgagggcaaggag
acggctttgctggtggaccggtacaagttcatggatctatatccctgttctccctgcgag
ctcaaagccctcggatacaaggatgtgtctcgtgccaaatatgcatcgatgatccaagaa
gctgtggtcactccatctgccccaacacaaaaagatgaggccgaccgcaaacccgagtac
cccaaacccgacatcagccagatgatccctttccagccacgacatctcgcccctcctgga
cttcaccccgtccctggaggagtgtttccggtcccacccactgctgtcattctcatgaag
ctcctccctcctccgggctgcttttcaggtccctttgtgcaagtcgatgagctgattgag
tctctcagaagatgtgtactgccagagacggtagaagctgctgtagagttgatcactggc
aaacagtttgagacgagcagtgaaggaaacggacctttggagaatcacgctgtggcaaac
aaatccttgaaaaggccaaatgcagattccgatgaggaggaagacaaagggtctgtcgcg
cctcccatccacgacatctatcgagcacgacagcagaagaggatccgatga
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