KEGG   Triplophysa dalaica: 130435594
Entry
130435594         CDS       T09616                                 
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
tdw  Triplophysa dalaica
Pathway
tdw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130435594 (edc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdw03019]
    130435594 (edc4)
Messenger RNA biogenesis [BR:tdw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130435594 (edc4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     130435594 (edc4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 Beta-prop_HPS5 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_EDC4L WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Prp19 WDR55 Beta-prop_WDR3_2nd Uteroglobin EIF3I
Other DBs
NCBI-GeneID: 130435594
NCBI-ProteinID: XP_056622312
LinkDB
Position
14:complement(8660997..8680964)
AA seq 1413 aa
MASSSNMDIEGATQHLRDILKLDLPANSAEPSLVICQRKTSFNGELNGVFGTEHIGTSGH
TALGEQPTHNSDKLNGQDTQTICLSGDDASTCVSIRANNVEIVSSHDSSIDSKARGSNKV
KIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERLLLKGFTGAV
TDLAFAHLDSNLLGCVDEAGNMFIWQLTMHNSKIEDEVIVHIRRPEDTPLNSNRRLIWCP
FIPEDNDENPEDTCQTLALLHEDRAEVWDLEILRSNNSSWPVDATDLKEGFITIRGHAAR
ISEGALSPDGTVLATASHDGYVKFWQIYIEGQNQPRCLHEWQPHNGRPLSCLLFCDNHKK
QDPDIPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPFNSGVLPSLKASLDLSAEL
LILSDVQRKVLYVMELLQDQEKGRASFTAVSEFLLTHPVLSFGVQDVTRTRLRHTEVLPP
DEESESMTTEGSQGPSESKSGIQIKLYCVHTKSLQDVQIWFQPNQEASSSLYMPEPQDGF
GFSDPMADLNVEAMSSDKESGDSGSQNDLTKILPLPTPADFMSPAPSAMPKLMTPDAFMT
PSTSMPTSPGSSASSLTIVSAMSSSDSGPRGGDDLTQSPKMSVECGSILTLNTSASSPRS
NSILISGLADNIQSISPPLVLSPSFLREASLLCEAAPYSHILPLPYFPSPPQVSHPNPPS
LDLQGIDPMVVPQASPTRARSPDVISSASTAMSQDIPEIASETLQRGLAGASVDPLDSIP
SLHSDSMASAASVLHLLSPRARSGADHGPLERGAAAMDGEQRLNNTPSLLETALSQENAA
AAAAVAGSCLDSIVNHSWPAAPDITRETRNSLRDNGLGDCSREEIKDRHISSPYHRHTYH
LTQNDSQDASAEQSDHDDEVASLASSSGNCGTRASHRLPVKEWKTSPRSSPKLKRKSKKD
EGESSQSRQIDSQMSVEVQDELLQMLRNQQRDIAELRRNQLDLLQRVTGHMDAVQSSIMA
HIEHAMLAQQDQERILTLGENSPPAGEIEKRMERLTNRLDKVVREEMKKTIPLTISKTLE
PVTGQLNSTIAAKLTAVEGALKENVTKVVKSKNTTDALGRAAAEAMQGPIQAAYKETFLS
IVLPVFERGCQSMFQQINDSFKQGTNDYIQQLETHIKNRKQRDPVIGQLQQMIDTLQNSQ
DKLANTVTASVCSDVQRQLHMTVGNLQDSILTQVQRIVKGEVSQAMKEQQAAVTSSIMQA
MRSAAGTPVPTAHMDYQAQQASILQLLQQGQLNEAFQQALSAADLNLVLYVCDTVDSQQV
FGQQPCPLHQAVLLSLIQQLSTNLGTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLSQV
RQKLFQFLQQDPNCPLSKRARRLMMMLQGLVNQ
NT seq 4242 nt   +upstreamnt  +downstreamnt
atggcttccagttctaacatggacatagaaggagcgacccagcaccttagggacatctta
aaattggatcttcccgctaattcggccgagccctctctggttatatgccagaggaaaaca
tctttcaatggagagttgaatggagtttttggaactgagcatattggaacaagtggacac
acagcactgggggagcagccgacacacaactcagacaagctcaatggacaggacacacag
accatttgcctttccggagatgatgcgtccacctgtgtctccatcagagcaaacaatgtg
gaaattgtgtccagtcatgattccagtattgacagtaaggcacgtggtagcaacaaggtt
aaaattcagccagtggccaaatatgactgggagcacaagtactactatggcaatttaata
gctgtgtccaattcatacttggcttatgccatcagaggcgccaacaaccattctatgatc
cgtgtgctgcggctgggttccactgaacgcttattgctcaaaggctttactggggcagtc
acagaccttgccttcgcccacctggattctaacctgttgggctgcgtggatgaggctgga
aacatgttcatttggcagctcacgatgcacaacagcaaaatagaagatgaagtgatagtt
cacatccgaaggcctgaggacactccactgaactccaaccgcagactgatctggtgtccc
ttcatcccagaggacaacgatgagaacccagaggacacgtgtcagacactagcactgctt
catgaagacagagcagaggtttgggatcttgaaatcctcagatccaataacagctcgtgg
cctgtggatgccacagacctgaaagagggtttcatcaccatcagaggacacgcagcacgc
attagcgagggagcgttgtcccctgacggcaccgtcctggccacagcgagtcatgatgga
tatgtaaagttttggcagatctacattgagggacagaaccaacccagatgcctgcatgaa
tggcaaccacataatggacggcctctttcctgccttctattttgtgacaaccacaagaaa
caagacccagacattccattctggcgcttcctcattactggagctgatcagaatcaggag
ctgaagatgtggtgcacagtttcatggacctgcttgcaaaccatcaggttttctccagat
ccattcaacagtggtgtgctacccagccttaaggccagtttggacctgtctgcagagctt
ctcattctcagtgatgtgcagaggaaggtgttgtacgtaatggagctgctacaggatcag
gaaaaaggtcgtgcaagcttcactgcggtttccgagtttctgcttacacacccggtgctt
agctttggcgtgcaggatgtcacccgcacacgactgcgccacactgaggttcttcctccg
gatgaggaaagtgaaagcatgacgacagaaggaagccaaggaccttcagagtccaaatct
ggaatccagattaaactctactgtgtgcacacaaaatcactacaggacgtccagatctgg
ttccagcctaaccaggaagcatcatcatccctctacatgcctgaacctcaggatggcttt
ggtttctccgaccccatggcagatctgaatgtggaggccatgagctctgataaggagtct
ggtgatagtggatcacagaatgacttgactaagattctgcctctcccaactccagctgac
ttcatgagtccggccccatcagccatgcccaaactcatgaccccggacgccttcatgacc
cccagcacctcaatgcccacctctcctggtagcagcgccagcagcctaactatagtttca
gccatgagcagttcagatagcgggccaaggggtggagatgatctgactcagagtcccaaa
atgtctgtggaatgtggcagcatcttgactctcaacaccagtgcaagtagcccaagatct
aattccatcctcatctcaggcctcgcagacaacatccagagcatctctcccccactggtt
ctctctccatcctttcttcgagaggcatctcttctatgcgaagccgctccttattctcac
atacttcccctcccttatttcccctcccctccacaggtttctcatccaaatcccccctcc
ttggaccttcagggtatagatcccatggtggtgccccaggcctctccgaccagagctcgg
tctccagacgtcatctcttcggcctctacggccatgtcccaggacatccccgagattgcc
tccgagaccctgcagagaggtctggccggggcttccgttgacccgctcgactccattccc
tccctgcattcagacagcatggcctcggctgcatccgtcctccacttgctgtctccgaga
gcccgtagcggcgctgaccatggtccactagagcggggtgcagctgccatggatggagag
caaagactcaacaacactccttcgctgttggagaccgccctgtcgcaggagaacgcagcg
gcggcagctgctgtcgcaggatcctgtttggacagcattgtgaaccactcgtggcctgct
gcaccagatatcacacgagagactcgtaacagcctgagagacaacgggctgggagactgc
tccagggaggagataaaggacagacatatttcttcgccctatcacagacacacttatcac
ctgacacagaacgacagtcaagatgcaagtgcagaacagagcgatcacgatgatgaggtc
gccagtctagcctcatcctctggcaactgtggcacccgggcctctcacagacttccagtc
aaggaatggaagacatcacctcgcagttcgcctaaactcaagaggaagagcaagaaagat
gagggcgaatcctcgcagtcgagacagattgacagccagatgagcgtggaggtgcaggac
gaactattgcagatgctgaggaaccagcagagggatattgcggagctcagacggaaccag
cttgatctgctgcagagggtcaccggtcacatggatgctgtacagagctcaataatggct
cacatcgagcatgccatgctggcgcaacaggaccaagaacgtatcctgacactaggggaa
aactcgccgccagctggtgaaatagagaaaagaatggaacgtctgaccaaccggctggac
aaagttgtgcgggaagaaatgaagaagaccatcccactgaccatatcgaagactcttgaa
cccgtgactggtcagttaaacagcaccattgctgccaaattaactgcagtcgaaggagca
ttgaaagaaaatgtcaccaaagttgtcaagtccaagaacactacagatgctcttggccgt
gcagccgctgaggccatgcagggccctatccaggcagcctacaaagagaccttcctaagc
atcgtcctgcctgtgtttgagagaggctgtcagtccatgtttcagcaaattaacgacagc
ttcaaacagggaaccaatgactacatccagcagctggaaacccacatcaaaaacaggaag
caacgggatcctgtgattgggcagctgcagcagatgattgacacactccaaaattcccaa
gacaagctggccaacactgtgacggccagcgtgtgctctgacgttcagcgtcagctccac
atgaccgtgggaaatctgcaggactccatcttgactcaggtgcagcgcatagtgaaaggt
gaggtgagccaggccatgaaggaacagcaggcagcagtcacctccagcatcatgcaggcc
atgcgctcggctgcaggaacgcccgtacccactgcgcacatggactaccaggcccagcag
gccagcattctccagttattgcaacagggccaactcaatgaagctttccaacaggctttg
tcagcagcagacctcaatctggtgctgtatgtgtgcgacaccgtcgactctcagcaggtg
ttcggccagcagccctgtccgctccatcaggctgtcctcctgtccctcatccagcagctc
tccactaacctgggcacgcgcacggagcttaaaatcagctatctggaggatgccgtgatg
aacctggaccatggggatccagtcactagagaccacatgtctgcagtgctgtcccaggta
cgacagaagctcttccagttcctgcagcaggaccccaactgtcccctgagcaagcgcgct
cgtcgcctcatgatgatgcttcagggtctggtcaatcaatag

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