Triplophysa dalaica: 130435595
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Entry
130435595 CDS
T09616
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130435595 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130435595 (ddx6)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130435595 (ddx6)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130435595 (ddx6)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130435595 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
130435595 (ddx6)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
130435595 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
130435595
NCBI-ProteinID:
XP_056622316
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All DBs
Position
14:16582182..16598658
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AA seq
484 aa
AA seq
DB search
MSTARMENPVILGLSNQNGQMRGSVKPAGGPGGGGGGSQITQPAQVKGSSTVNNGNSQPA
PTANTIIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKP
SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDNIQAMVIVPTRELALQ
VSQISIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVIIATPGRILDLIKKGVAKVSQ
VQMVVLDEADKLLSQDFVTMMEELLSSLSKQRQILLYSATFPLSVQKFMNTHLQKPYEIN
LMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGY
SCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYL
HRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESGE
EVKL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagccagaatggagaaccctgttattcttggactgtcgaatcagaatggccaa
atgagaggctctgtgaagccagcagggggccctggaggtggtggaggggggtcccaaata
acgcagcctgcccaggttaaaggctccagcacagtcaacaatggcaactctcagcctgcg
cccacagccaacaccatcattaagcctggggatgactggaagaagaatctgaagcttcct
ccaaaggatatgcgcatgaaaacttcagatgtgacggccaccaagggaaacgagtttgag
gattactgcctgaagcgggagcttctcatgggcatctttgaaatgggctgggagaaacca
tcacctatacaggaggagagcattcccattgcgttgtctggaagggacattctggcaaga
gccaagaacggcacaggaaaaagtggcgcctacctcattcccttacttgaacgcattgac
ctgaagaaagacaacatacaagcgatggtcattgtgcccactagagaactggctctacaa
gtgagtcagatctccatccaggtcagcaaacacatgggcggggttaaggtcatggcaact
acaggtggaaccaacctccgtgatgacataatgagactggatgaaacggtgcatgttatc
attgccactccaggaagaatcttagacctcatcaaaaagggggtggccaaagtcagccaa
gtacagatggtggtgttggatgaggctgataagctcctgtcacaggactttgtaacgatg
atggaagaacttctcagctccttgtccaaacaaaggcaaattcttctgtattctgccact
ttcccactgagcgtgcagaagtttatgaatactcacctgcagaagccctatgagataaac
ctgatggaggagctgaccctcaaaggagtcacccagtattacgcctatgtaactgaaagg
cagaaagtccattgccttaatacgctcttctccaggctccagatcaatcaatcgataata
ttctgcaattcatcccagcgagtggagctcttggccaagaagatatctcagcttggttac
tcgtgtttctacattcacgccaagatgagacaggaacacagaaaccgtgtgttccatgac
ttcagaaatggcttatgtcgaaatctcgtctgcactgatctcttcacaagaggaattgat
atacaagctgtgaatgtggtgatcaactttgatttccccaaacttggggagacgtacctc
catcgcattggcagatccggtcgtttcggacacttgggtcttgccattaacttgatcacc
tacgatgaccgctttaacctgaagggtattgaagaacagctgggtactgagatcaagcct
attcccagcagtattgacaagagtctatatgtggccgagtaccacagtgaaagtggggag
gaggtcaaactgtga
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