Triplophysa dalaica: 130435652
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Entry
130435652 CDS
T09616
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130435652 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130435652 (sf3b3)
03041 Spliceosome [BR:
tdw03041
]
130435652 (sf3b3)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130435652 (sf3b3)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130435652 (sf3b3)
Spliceosome [BR:
tdw03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
130435652 (sf3b3)
Complex B
130435652 (sf3b3)
Complex C
U2 SnRNP specific factors
130435652 (sf3b3)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
130435652 (sf3b3)
TFTC complex
130435652 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
130435652
NCBI-ProteinID:
XP_056622400
LinkDB
All DBs
Position
14:complement(7436947..7453170)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGITHAIHGNFSGTKLQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFG
VIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHSSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAFMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRKHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
TQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAACRFSNGG
DEWYVLVGVARDMILNPRSVGGGYIYTYRLGGGGDKLEFMHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNIVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADETYPRWVTTACLLDYDTMAAADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttacaatctgaccctgcagcgggcgactggaatcacccatgccatccatggc
aacttctcaggaaccaagctgcaggagattgttgtctcccgtgggaagattattgagctg
ctgcgtcctgatgccaacacgggcaaagtccacacactacttactatggaggtatttggt
gttatccgatccctcatggccttcaggctgacaggtggaactaaagactatgttgtggtt
ggcagtgattctggtcgtattgtaatcttggagtaccattcctccaagaacatgtttgag
aagattcaccaggagacatttggcaagagtgggtgcagacgcatcgtgccaggacagttc
cttgctgtggatcctaaggggagagcttttatgataggtgccatagagaagcaaaagttg
gtatatatccttaacagagatgcagctgcccgtcttaccatctcctcccccctggaggca
cacaaagccaatacgctcgtttaccacgtggttggggtggatgttggctttgagaacccc
atgtttgcctgcttggaaatggattatgaggaggcggataatgatcccactggagaggct
gcagcaaacacgcaacagactctcaccttctatgagctggacttgggacttaaccatgtg
gttcgcaagtacagcgaggcactggaggaacacggcaacttcctcatcacagtgcctggt
ggttctgatggacccagtggtgtgctgatttgctctgagaactacataacctacaaaaac
tttggagaccagcctgacatccgttgtccaatccctcgcaggaggaatgacctggatgat
cctgagcgaggcatgatctttgtctgctcggccacccacaagaccaagtctatgtttttc
tttctggctcagacagagcagggagacatctttaaggttaccctggaaacagatgaagaa
atggtgacagagatcaggatgaagtattttgatactattcctgtggctacagccatgtgt
gttctgaagactggcttcttatttgtttcttcagagtttggaaaccactacctgtatcag
attgcccatttgggagatgacgatgaggaaccagagttttcctccgccatgcctctggag
gagggcgacacattctttttccagccccgccctctcaagaacctggtgctggtggatgag
caagaaaatctttctcccatcatgtcttgccagattgccgatttggctaatgaagacact
ccccaactgtatgtggcgtgtggcaggggacccagatctacactgagagttctaagacat
ggacttgaggtgtcagaaatggctgtttcggaactgcccggtaaccctaatgctgtgtgg
actgtcaggaaacatgtggaagatgagtttgacgcttacatcatcgtgtctttcgttaat
gccaccttggttctttccatcggagagactgtggaagaagtgacagactccggtttcctg
gggacaacacccacactgtcctgctcgttgctgggagaagatgcacttgtgcaagtgtac
cctgatgggatccgtcacatccgggcggataagagagtgaatgaatggaagactccagga
aagaagaccatcgtccgatgtgctgtgaatcagaggcaggtggtcatcgctttgactgga
ggagagcttgtgtattttgagatggatccgtctggacagctgaatgaatacacagaaagg
aaggagatgtctgcagatgtggtgtgcatgagcctggcaaacgtgccccctggagaacaa
cgctcccgtttcctggctgttgggttggtagacaataccgtccgcatcatctccctggat
ccatcagactgtcttcagccattgagcatgcaggctcttcccgcacagccggagtctctt
tgtatcgtggaaatgggcggagtggaaaaacaggatgagctgggtgaaaaaggcactatc
ggcttcctttatctcaacattggtctgcagaacggagtgttgctgcgtacagttttggac
ccagtgaccggagatctgtctgatactcgtacccgttatctcggctctcgtcctgtcaag
ctttttagagtccggatgcaggcccaagaagctgttctggccatgtccagtcgctcatgg
ctgagttattcatatcagtctcgtttccacctgaccccactgtcatatgaaaccttggaa
tacgcctcaggctttgcttcggagcagtgtccagaaggcatcgttgccatctccaccaac
acactgagaattttggctctagagaaactgggcgctgtctttaaccaggtggcattccca
acgcagtacacacctcgcaagttcgtcatccacccggagaccaacaaccttatcttgatt
gaaacggaccataatgcctacactgaggccaccaaagcccaacgcaagcagcagatggcc
gaggaaatggtggaggctgcaggagaggatgaaagggagctagctgccgaaatggcagcc
gcattcttgaacgaaaaccttccagaagctatctttggggcaccaaaagcgggttctggg
cagtgggcctcactggtccgtcttatcaaccctattcagggcaacacactggacctggtg
caactggagcagaatgaagcggccttcagtgttgctgcctgtcgcttttccaatggagga
gacgagtggtatgtgttggtgggcgtagccagagatatgatattaaatccgcgctctgtt
ggtggaggatatatttacacttaccggctgggagggggtggggacaagctggagtttatg
cacaagacgcctgttgaggacgttcccctggctatagctccctttcaggggcgagttttg
gtgggagtgggcaagctcctgcgcatctatgacctgggaaagaagaaacttctccggaag
tgtgaaaacaagcatgttcctaacatagtgactggtatccacaccattgggcagcgtgtg
attgtgtctgatgttcaggagagtctattctgggttcgatacagacgcaacgagaaccag
ctgattattttcgcagacgaaacatatcctcgctgggtcacgaccgcctgcctgctcgat
tatgacaccatggctgccgccgataagtttggaaatatctgcgttgttcggctgcccccc
aacaccagcgacgatgttgatgaggaccccacaggcaacaaagcattatgggacagaggc
ctcctcaacggagcatcacagaaggctgaggtgattattaactatcacataggagagact
gtgctgtcccttcagaagaccactctcatccctggaggatcagagtctttggtgtacacc
acactatcagggggcatcggcatacttgtgcccttcacttctcatgaggatcatgacttc
ttccagcacttggagatgcacatgcgctctgagtttcctcctctttgtggccgagatcac
ctcagcttccgttcctactatttccctgtgaaaaatgtgatcgatggagatctgtgtgag
cagtttaactccatggacccccataagcagaagagcgtggccgaggaattggaccgcact
cctccagaggtgtctaaaaaactggaagacatccgaacacgctatgctttctaa
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integrated database retrieval system
