Triplophysa dalaica: 130435819
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Entry
130435819 CDS
T09616
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130435819 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130435819 (dhx36)
03012 Translation factors [BR:
tdw03012
]
130435819 (dhx36)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130435819 (dhx36)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130435819 (dhx36)
Translation factors [BR:
tdw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130435819 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
NB-ARC
NPHP3_N
ATPase
AAA_14
TsaE
Rad17
DUF7428
Motif
Other DBs
NCBI-GeneID:
130435819
NCBI-ProteinID:
XP_056622648
LinkDB
All DBs
Position
14:12799251..12828138
Genome browser
AA seq
1021 aa
AA seq
DB search
MSYGNGNRRGRRGGGGGGGRRFGDGSRWDAEAGSSGGGYQRNSEWDSKEDRGHGGGRRGG
GGQGKHPPHLKGRDIGLWYAKFGGIGRSEAERNSRAVVQMDASREQHITRLLNSVQRDPH
SDSLPSSSRNRSVKEEPGSHSYFDGDPPESQNNQRLPKTELKEEKQNELETSVKTGLNCE
KDLQYLCHYVQRQPSLDEELKKDLQKKIDNQRYLDMLKFREQLPSYAMKEELVRLITENQ
VLVISGETGCGKTTQVTQFILDDYIQRGMGSLCRVVCTQPRRISAISVAERVAAERAESV
GDEKSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDPYLSSISHLVLDEVHERSLQSD
VLLNIVKDLLRTREDLKIVLMSATLNAEKFSRYFDNCPMVHIPGYTYPVEELLLEDVVEM
LRFKPLHRREHRPRPRRGFMHGQNVRQEKEQKDAEYRESWPCYTRTLRERYSDSTIDALE
MMDDDDKINLELIVALIRHIVRNEDNGAILVFLPGWDNISTLNDLLMADQMFKSDRFKII
PLHSLMPTVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN
ISTMTAEWVSLANAKQRKGRAGRVAPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQ
IKILKLGPIAVFLQRCVDPPSERAIELAITHLIDLNALHRNEELTPLGFHLARLPVEPHI
GKMILFGALLGCLDPVLTIATSLSFKDPFFIPLGKEKIADHRRKTLSRNSKSDHITVVNA
FWGWEDAKEQGGRSEREYCWDNFLSANTLQMLQNMKGQFAAHLLAAGFVNCKDPKDPSSN
INSENEKLIKAVIVAGLYPKVAKIRPSNNSKRLMPPKVSTKADGKVCIHPKSVNAEETQF
NYTWLIYHLKMRTTSIFLYDCTEVSPFSLLFFGGDISIQKDKDQETIAVDEWIVFQSPAR
IAHLVKDLRKELDVLLEDKIKKPQPVDWNDGQSKDCAVISAIIDLITTQESPAGGSRRGS
Y
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgggaatggtaacagacgcgggcgaagaggaggaggcggaggtggaggcaga
cggttcggcgatgggtccaggtgggatgctgaggctggatccagcggaggaggataccaa
agaaactctgaatgggactcaaaggaagatcggggacatggagggggacgaagaggagga
ggcgggcaaggcaaacaccctccccatctaaagggtcgagatatagggctgtggtatgcc
aaatttggaggcattggaagatccgaggcagagagaaactctagggctgtcgttcagatg
gatgcatcacgtgagcagcacatcactaggttattgaactctgtccagagagatccacac
agcgactccctaccctcctcatccagaaaccggagtgtgaaggaggagcccggcagccac
agttactttgatggagatcctccagaatctcagaataatcagagactgccaaaaactgag
ctcaaggaggagaagcagaatgagttggagacgagtgtgaaaactggactcaactgtgaa
aaggatctgcagtacttatgccattatgttcagcgtcaaccctccctggacgaggagctc
aagaaagatctgcagaagaaaattgataaccaaagatacctcgatatgctgaaattcaga
gaacagctgccatcgtatgcaatgaaagaggagctggtaaggctgattactgaaaatcag
gtactggtgatcagtggagagactggctgtgggaagaccacccaggtcactcagtttatc
ttggatgactatattcagaggggcatgggctctctgtgcagggttgtctgcacgcagcca
cgtcgaatcagtgccatatcagtagcagagagagtagctgcagagcgtgcagaatcggta
ggagatgagaagtcttgtgggtatcagattcgtctgcagagccggttgccacggaaacaa
ggctccgtgttgtattgtacgacgggcattattcttcaatggctccgctcggatccgtat
ctctccagtataagtcatctggtcctggatgaggttcacgagaggagtcttcagtcagat
gttcttctcaatatcgtgaaagacctgttacgtactcgggaagacctcaaaatagtcctc
atgagtgccacgctcaatgctgaaaaattcagcagatatttcgataactgtcccatggtt
catattcctggatacacatacccagtggaagagttgttactggaggatgtggtggaaatg
ttaagattcaagccactgcaccgacgggagcacagacctcgacccagaagaggatttatg
cacggccagaatgtacggcaggagaaagagcagaaagatgctgaataccgcgagagctgg
ccctgctacacccgcacgctcagagagcggtattcagacagcaccatcgacgcattggag
atgatggatgatgatgacaagatcaatctggagcttatcgtggcattgatccggcatatc
gtgaggaacgaggataatggagcaattctagtattcttgcctggctgggacaacatcagc
accctgaatgatctgcttatggctgaccagatgtttaaatcagacagatttaaaataatc
ccccttcactctttgatgcccacggtgtctcagactcaggtgttcaaaaagccgcctcca
ggagttcgcaagattgtgatcgcgaccaacatcgcagaaaccagcatcacgatagatgat
gtcgtgtacgtgatcgacggagggaagattaaagaaactcattttgacacgcagaacaac
atcagcaccatgactgcagagtgggtgagcttagccaacgccaaacagaggaagggccgc
gctggcagggtggctcctgggaaatgctaccacctgtataatggattgagggccagcctc
ctcgataactaccagctaccggagatccagcgcactccattggaagagctttgcttgcaa
ataaagatcttaaagttgggccccattgcggttttcttgcagagatgtgtggaccctccc
tcagagagagccatagagctggctatcacacacctgatagacctgaatgctctgcaccgc
aatgaagagttgaccccgttgggatttcatctcgcccgtttgccggtggagcctcacatt
ggaaaaatgattctgtttggggctcttctaggatgtttggaccccgtgcttaccatcgca
accagcctaagctttaaagaccccttcttcataccgctggggaaggagaagattgcagac
cacaggagaaaaaccctctctaggaactccaagagtgatcatattactgttgtcaatgct
ttttggggctgggaggatgctaaggaacagggcggcaggtctgaacgtgaatactgctgg
gacaacttcctgtctgccaacacactacagatgcttcagaacatgaaaggtcagtttgcg
gcgcatcttttggcggctgggtttgtgaattgcaaggaccctaaagatcccagctcaaac
ataaactcagagaacgagaagctgataaaggcggtgatcgtggcaggcctgtaccctaaa
gtagccaagattcgccccagcaacaatagcaagagactcatgcctccaaaagtgtccaca
aaagctgatgggaaagtttgcatccatcctaagtctgttaatgccgaagaaactcagttc
aactacacatggctcatctatcacctaaagatgagaaccacaagtatcttcttgtatgac
tgtacggaggtgtcaccattttcactgctgttctttggcggagatataagcatacagaag
gacaaagaccaagagaccatcgctgttgacgagtggatcgtcttccagtctccggcacgc
atcgctcaccttgttaaagacctgaggaaggagctggatgtgttactggaggataaaata
aagaaaccccaacctgtggactggaatgacgggcaatcgaaagactgtgctgtcatttcg
gccatcattgatcttataaccacacaggaaagtccagctggaggatctaggaggggcagc
tattga
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