Triplophysa dalaica: 130436050
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Entry
130436050 CDS
T09616
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130436050 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130436050 (utp4)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130436050 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
PROPPIN
Beta-prop_WDR19_1st
DUF7165
Beta-prop_ACSF4
WDR90_beta-prop_4th
RMC1_N
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
130436050
NCBI-ProteinID:
XP_056622935
LinkDB
All DBs
Position
14:complement(5874498..5879316)
Genome browser
AA seq
685 aa
AA seq
DB search
MGEFKVHQVRFFEYMPTGIRALAFHAQNEKMAVARMDGSVEICDCSDNFFQEKVIPGREQ
SGIEALSWVGDRLFSAGLNGEIAEYDLTNQKVKYTIDAYGGPIWTITGNKQGTHLAVGCE
DGNVKLFEVIEDKIQFERNLNRQKGRIISLSWHPSGSKIAAGMMDMIQVFNVETGNSIHR
MLVDRGLRRSRSEECVVWSVVYLSDGTIISGDSAGMVKMWDDCTGTLIKSHSVTKSDVLA
LSVSQKEDSLVAGTSEGCVVQFQFISVVLEKDEKEWVRTRTFKNHTHDIRAVAEITTAVV
SGGMDTQLVVRPLLDKVEVRSTASALRKILFPHRRLVSCAKKAGLMLFQYPSHLELWRLG
ESEGQSTPGSSLPIRRKPEKLLFLKVKGEEHIRCSVVSPCGEWIAYSTASSLRLYRLHCD
NNNVSITKMSKLPKVLSSANQLCFSPDSSHLFSASTESSVHIVSLNQLGCKYVATLKPKS
GSKQAINLLTASEDGNWLASANSDHEVQVYNLQKRKTHCTVPIYSSAVSAIAFHPTTNCL
FMVHADQQMFEFSIEQKQYTDWSRSVQRNKLHHIWLERDTPVTNVMFDPKNPSHVILHDM
YMLCVIDKSLPLPENSSQFYNQLTLKSLPAEERKFYSHAFKICKTFRAILCVEQMLDQSL
VVVERPLTDITTQLPAPIKQKKFAT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggggagtttaaagtccaccaggttcggttctttgaatatatgccaacgggaatccga
gctttagctttccacgcgcagaatgaaaagatggcagtagcgaggatggacgggtctgtg
gagatctgtgattgttctgacaactttttccaagaaaaggtcatccctggaagagagcag
agcgggatagaagctctgtcctgggttggagaccgtctgtttagtgcaggactaaatggt
gaaattgcagaatatgatctaacaaatcagaaagtaaaatacaccatagatgcatacggt
gggcctatctggaccattacaggcaataaacaaggaacacacttggcggtcggttgtgag
gatggaaatgtgaagctgtttgaggtgattgaagacaaaatacagtttgagagaaatctt
aacaggcagaaaggtcgcattatttctctttcctggcacccttcaggctccaaaatagca
gctgggatgatggacatgatccaggtttttaatgtggaaacaggcaactccatacacagg
atgctggtggacagaggtctcaggaggtcccgaagtgaggagtgtgttgtgtggagcgtg
gtctacctctcagatggcaccatcatcagcggagactctgctggaatggttaaaatgtgg
gacgattgcactggtacactgattaaaagccacagtgtcaccaaaagcgatgtgttagcg
ttgtcagtctcacagaaagaggacagtcttgtcgccgggacatcggagggatgtgtggta
cagttccagttcatctctgttgttttagaaaaggacgagaaagaatgggtcagaaccaga
acatttaagaaccacacacatgatatcagagccgtggcagagatcacgactgccgttgtg
tcaggaggtatggacactcagctggttgtgagacctttattagacaaggttgaagtgaga
tcaacggcatcggccctccggaagattctttttccacataggagactggtttcgtgtgca
aagaaggccggtctgatgctgtttcagtacccgagtcatctggagctgtggagacttgga
gagagtgaaggacaatccacacctggaagcagtttacccatcaggagaaaaccagagaaa
ttgctttttttaaaagtgaagggtgaggagcacatccgctgcagcgtcgtgtccccgtgt
ggagaatggattgcttattccacagccagcagtttacgactgtacagactacactgtgac
aataacaacgtcagcatcaccaagatgtccaagctcccaaaggttctcagttcagccaat
cagctttgtttctcaccagactcctcccatttgttctcggcctccacagagtcatctgtc
cacatagtgtctctcaaccaattagggtgcaaatacgtggccactcttaaaccaaagtca
ggctctaagcaggcgattaacttgttaaccgctagtgaagatggcaactggttggcctca
gcaaacagtgaccatgaagttcaagtctacaatctgcagaagcgaaagactcattgcaca
gtgcctatctacagttcggctgtcagcgcgattgcgttccacccaaccacaaactgcctg
ttcatggtacatgcagatcaacagatgtttgagttttccatagagcaaaaacagtacaca
gattggagcagatcggtgcagaggaacaagcttcatcatatatggctggagagagacaca
ccggtcaccaatgtgatgtttgaccccaaaaatccatcccatgtcatcctgcatgacatg
tacatgctctgtgttattgataaaagcctgccactccctgaaaacagctcacagttttac
aaccagctgaccctgaagagccttccagcagaagaaagaaaattttacagccatgctttc
aaaatctgcaaaacctttagggcgatcctgtgtgtagagcagatgttagatcagtctctt
gtggtggttgagcgccctctaactgacatcaccactcagttgccggcacccattaaacag
aagaaatttgccacataa
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