Triplophysa dalaica: 130436449
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Entry
130436449 CDS
T09616
Name
(RefSeq) protocadherin Fat 1
Organism
tdw
Triplophysa dalaica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_pro
Ig_BT4661_3rd
RibLong
Ig_Cad99C_N
Big_9
CDH23_a-b
TMEM98_N
Motif
Other DBs
NCBI-GeneID:
130436449
NCBI-ProteinID:
XP_056623074
LinkDB
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Position
2:4137079..4158807
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AA seq
1586 aa
AA seq
DB search
MAVRLEVAVEWLEAVGLEVVIGLDVVLGPDVVFGLDVEVGLVVVVRLLVVVGLEVVVGLI
VEATNDITIIGFCTTEINCQRGSEITVGSVQEGYEGDIEIISNIQPDDRVVLEFHYFPIG
VTFLTLVYSDGDTNAIVRTNKPLDAEVLSETQAVGSYVLYVQAADADVSPSNNILSYSIV
PSAPDEFELGNDGNIKLKKHLDFNVAESHIFTVEAKDPDGLNDTATVTITVMDYDNLNPY
FHHSLYKASIEENQVGIFSVVTPEAIKAQDGDKGINEPVVYSITSVHPNKYQPHFAIDQI
TGVISVTTALDREEIDQITVYLQATQQDDTSKTANTVLYVTIVDVDDNPPKFEQDQYTAT
IPENSPLDQVVFQTRVTDLDMGGFVGTFRIIPDSVPFSIGPDGIVRVKNSVELDRENTPN
FSFQVEAQDDPPSSNTATAEVNVILMDENDNSPRFTSAKYEGKVYSNQTTGMPVVKVEAA
DLDEGPNGEISYAIEFGNEEGYFSIDGNTGEITLLNTIPLMENKILQFALYVTAKDGGVI
TRSTSALVDIKAPGDSRPQFLKKTYQGQVEEEQSGADIVKIDFLSIDPIVPVTLTVESEA
EKFSIDQNTGVLSTKVKLDYELKSSYTVQMSITDGTNRDEASVQVDVLDINDNSPAFVLN
PAGATIPEDLTVGDNVTSVQARDADSDLNGEVWYTLLGGAGRFIIDEETGVITVGAPLDR
EDKDEYNLEITARDQGRPSRFTTITLDISITDINDNAPIFSKQQYEVTVSEHAMVGTDVL
NVTAVDKDKGSNAVVTYHIVRQEPPSTPPIFSIDAVTGSVHLAEKLDYSRVKRFTLQVEG
RDGGSPVLIGSAVVIVWVEDVNDKGPEFSMEQYNVAVYENLPSGGALVSLEVTDQDEGGF
SKGYFILDSDTFAINAQGVILLRTNATLDRETKDNYILQTVAVDQPVDGQSATAQVNITV
LDVNDNNPEFLALPELTEIREGAYTSSSPGVVCMISAADSDIGDNGRVTISTSSHSDLFQ
FKEDGTLLAVSELDREKEDVYDLVIVAMDHGIPQRNNITTLRVSITDINDNAPVFSSKIY
SKSILVKDTKIGDLLLTLYATDRDAGNNSLLTYSFSEDTSVVSLDAETGDVTLTSDLSDL
TEDTLLNLTAKVTDHGTPSKSATADVLIDIRMVSLTEGMAFASSYNFSIKENEPVATKVG
TVKASTGSSQDTVSYSIRSHVDVFSVDADGTIKALQELDKEKEEWYILTVEATDSRTPPN
TAETMVRVQVENVNESPEFTAEKYEAEIFSISPYKFPIVKVQASDPDVGESSELQYTLLK
PTTLLDVDHLTGQLYVLDASSFGGSQVTCEVKATDKHGQSTTTTVQVNIKETATISVVVI
SLNQPVFTVEKKLLEIQESLQKALGWTVKILSVAAESQNQILRESTTKTFISFIAVDSSG
AVIPAKEVKEMLLKEQAAVTAELEKVFGSSLDIELEEGSGNSGDSGEAAVIALGVTLAVF
VVAFVVLMTVYVVKFRKTNKDTDSDKESFNIEKHSPFKHRSSITKNCYHDENPEVVKTKE
EQNSHQSDSEKENDDDDRNENSVSSF
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcgacttgaggttgcggtggagtggcttgaggctgtgggacttgaggttgtg
atcggacttgatgtggtgttgggacctgacgtcgtgtttgggcttgatgtcgaggtgggc
cttgtcgttgtggttagacttttggtggtagtagggcttgaggttgtggtggggcttatc
gttgaggctacaaatgacatcaccattattggcttctgcacaacagagatcaattgtcaa
cgtggaagtgaaatcactgtagggagcgtccaggagggatatgagggagacatagagatt
atcagcaatatccaacctgatgatcgtgtagttctggagtttcattattttcccattggt
gtgacattcctgacactggtttactctgatggagacactaatgctattgtacgcaccaac
aaaccattggatgctgaagtgctctcagagacgcaggcagtgggctcatatgtgctttac
gtgcaagctgcagatgcagacgtctctccaagtaacaacatactttcttattctatagtg
ccttcagcgccagatgagtttgagttgggaaatgacggaaacattaaattaaaaaaacat
ttggacttcaacgtcgctgaaagccacatctttactgtggaagccaaagatccagatgga
ctcaatgacactgccacagttacaataacagttatggattacgacaacctaaacccatat
ttccatcacagcctttataaagcatccatagaggaaaatcaggttgggatcttctcagtg
gtcactcctgaggccattaaagcacaagatggagacaaaggcatcaacgagccggtagtt
tacagcataacatcagtccatccaaataaatatcagccccacttcgcaatcgaccaaatc
actggggtcatctctgtgacaacagcactggacagagaggaaatagatcagataaccgtc
tacctacaggcaactcagcaggacgataccagtaagactgctaacactgtgctatatgtc
actatagtggatgtggatgataacccaccaaaatttgagcaggaccagtacacggccact
attccagaaaattctccactcgaccaagttgtgtttcagactagagtcaccgatctagac
atgggagggtttgtaggaacattccggattattccggactccgtccctttttcaatcggt
cctgatggaattgttcgggtgaagaattctgtggagctggacagagagaacacacccaac
tttagttttcaagttgaagcacaagacgatcctccgtccagcaacacagcgacagccgaa
gtgaatgttattctcatggatgagaatgacaacagtccacggtttacatcggccaagtac
gagggcaaagtttatagcaatcagaccacaggaatgccggttgtcaaggtggaggcagca
gacctggatgaaggtccaaatggggaaatcagttatgccattgagtttggaaatgaagaa
ggttattttagcatcgatgggaacactggggagattacactgcttaatacaattcctctg
atggaaaacaaaatccttcagtttgcgctgtatgtgactgcaaaagatggtggtgtaata
accagatcgacttctgctctggtggatatcaaggcacctggagattcccgtccacagttc
cttaagaagacgtaccagggtcaggtagaggaagagcagtcaggagcagatattgtgaag
atagacttcctatccatcgacccgatcgttcctgtgacgttaacggttgaaagcgaagcc
gaaaagttctccatagaccagaatacaggtgttctgtcaaccaaagtcaaactcgactat
gagctgaagagcagctacactgttcagatgtccataacggatggaaccaaccgggacgag
gcatctgttcaggtcgatgtcctggacatcaacgacaacagtccagcgtttgtacttaac
cctgcaggggctacaataccagaagatctcacggtgggagacaacgtaacatccgtccag
gccagggatgcagattcggatctgaatggtgaagtgtggtacactcttctaggaggagcc
gggaggtttattatcgatgaggaaacaggagtgataactgtgggggctcctctcgaccga
gaggacaaggatgagtacaacttggagatcaccgcccgagatcaaggtcgcccatcacgt
ttcaccaccatcacattggacatctcgataaccgacatcaacgacaatgctcccatattt
tccaagcaacaatacgaggtcacggtgtcagagcatgcgatggtaggaacagatgtgctc
aacgtaacagcggttgacaaagacaagggttcgaacgcagtggtgacctatcacatcgtc
agacaagagccgccttccacaccacccatctttagcatagacgctgtgaccggttccgta
catcttgctgaaaagctggattatagcagagtgaagaggtttactcttcaggtggaggga
cgagatggaggaagtccagttctcataggaagtgccgttgtcatcgtgtgggtggaagac
gtgaacgataaggggcctgagtttagtatggagcagtacaatgtggccgtctatgaaaat
ctgccaagcggaggcgctctggtgtccctggaggttacagatcaggatgagggtgggttt
tcgaaagggtactttatcctggatagtgatacctttgctatcaacgctcaaggcgtaata
ctgctcaggactaatgccaccctggatagagaaactaaggacaattacatactacagaca
gtagcagtagaccagcctgtggacggtcagagcgccacagctcaggtcaacatcactgtt
ctcgacgtcaatgacaacaacccagaattcttggctctcccagagctcactgagatccgg
gagggtgcttacacgtcctcttcacccggagtggtgtgcatgatctcagcagcagactcg
gacattggagacaacgggcgggtcaccatatccacttcctctcacagcgacctgtttcaa
tttaaagaggatgggactctgctggctgtcagcgaacttgatcgggagaaagaggatgtg
tacgatttggtcatcgttgctatggatcatgggattcctcagagaaataacatcaccacg
ctgagggtcagtatcacagatatcaatgacaacgctcctgtcttcagctctaaaatctac
agcaaaagtattctagttaaagacaccaaaattggagacctgctattgacgctctacgca
acagatagagatgctggaaataactcgctcctgacatacagtttctctgaagacacctct
gtggtctctctggatgccgagacgggagacgtcactttgacgtccgacctcagtgacctc
acagaagacacactgctcaaccttacggctaaagtgacggaccacggaacgccatcgaaa
tctgccacagctgacgttttgatcgacatcagaatggtgtcactcacggagggcatggcc
tttgcgagctcctacaacttctcaattaaagagaatgaacctgtggccacaaaagtgggc
acagtcaaagcatccacaggaagttcacaggatacagttagctacagcatcaggtcgcac
gtggatgtcttctctgtggatgccgatggaaccatcaaagctctccaagagctggacaaa
gagaaagaggagtggtacattctcactgtggaagctacagactccagaactcctccaaat
acagcggagaccatggtccgtgttcaggttgagaatgtgaacgaatctcctgagtttacc
gctgagaaatacgaagcagaaatattcagcatctccccgtacaaatttcccatagtgaaa
gtccaggcgtctgaccctgatgtaggagaaagttcagagctgcagtacaccctgttgaag
cccaccacacttctggatgtggaccatctcactggtcaactgtatgtgctggatgcatct
agttttggaggctctcaggtcacctgtgaagttaaagccacagataaacacggacagtcc
acgacgacaactgtacaggtcaacattaaagagacggcaactatcagcgtcgtggtgatc
tctcttaaccaacccgtctttactgtggagaaaaaacttctagagattcaagaatctctg
cagaaagcgctaggctggactgtgaagatcctcagtgtagcagctgagagtcaaaatcag
atcctcagagaatcgaccaccaaaacattcatcagctttatcgccgtggacagcagtggc
gccgtcattcctgccaaggaggtcaaagagatgttactcaaggaacaggccgctgttaca
gcagaactggagaaggtgtttggttctagccttgacatcgagctggaggaaggttccgga
aactctggagattcgggtgaagcagccgtcattgccctcggtgttaccctggcggtcttt
gtagtggcttttgtagtgctgatgaccgtctatgtggttaagtttagaaaaacaaacaag
gatacagattcagacaaagagagcttcaatatagagaaacacagcccattcaaacacaga
tccagcataaccaaaaactgttaccacgacgaaaacccagaagttgtcaaaacaaaagag
gagcagaatagtcaccagtcggattctgagaaagagaatgacgatgatgacagaaatgaa
aacagcgtctcctccttctaa
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