Triplophysa dalaica: 130436646
Help
Entry
130436646 CDS
T09616
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130436646 (dicer1)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130436646 (dicer1)
microRNA pathway
RISC loading complex
130436646 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
DEAD
ResIII
Helicase_C
Cas3-like_C_2
DSRM_2
dsrm
Motif
Other DBs
NCBI-GeneID:
130436646
NCBI-ProteinID:
XP_056623470
LinkDB
All DBs
Position
15:complement(4905050..4927021)
Genome browser
AA seq
1874 aa
AA seq
DB search
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLIKELSHQIRGEDGRRTIFLVNAASSVVQQASTVRTHSDLKVGDYKSEEMTSWP
EEMWTREMMENQVLVMTCHIFLHVLRTGVLPLSKINLLVFDECHLAITDHPYREIMKICE
GCPGCPRILGLTASILNGKCDPCVLEQKIQNLEKILQSNAETATDLVVLDRYATQPREVV
LDCGLYRDESGLSERLLSELDEALHFLNDCNLTAYREDRDPTFISKQVLNDCRAVLDVLG
PWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVT
PKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEAKEKPEANF
PSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQM
EVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRAR
APVSNYIMLADSERTKSFEEDLKTYKAIEKILRNKCSKSAECSELEPVNDDDNVLPPYVL
RSEDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCKTLELKATGYQSILFLPINSPLR
VPVPGPIMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETNV
PGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYPPE
DTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLSAEQLELITRLHQYIFSH
ILRLEKPALEFKPTEADSAYCVLPLNIVEDSNTLDLDFKFMEEIEKSEARIGIPNTKYTK
QNPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKY
DLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPE
LCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGSQTLPPDFRYPNLDF
GWKKSIDSKSFISCPSACMDNNDHCKHDTSSDSDHTACSTEASQPPEGALPCKNCNTPDE
KLENVLPVTDLQTPNQDEGARICSRNIPNGTRGDDDLSHSRDICQCSQPGSESDLSTQTT
TSVQARLSPASEPQPRPGDECTPGGNSDLCDGHVKKPTSYCCPKPDTATSTTAPSTVSSE
ISGVTSASACEPPSWDSPKMLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHGITT
YLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQ
DKSSTDKWDSDENKDLANGKASEDEDDDEDDDGVVEDEPPKEEVNTEEDDLEYYDEHIKF
IDNMLMGSGAFGKKISLQPPEPWYEWKAPKKAHHAHFAPEGAADEFDYSSWDAMCYLDPS
KAGEEDDFVVGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCG
ERAAQLFLCSLGLKVLPVEQESSGRSAELQYGRLKIPPRCIFEHPDAERTLNHLISGFEN
FERKISYTFKNQAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS
PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSE
LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSAN
VPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRA
LRSLKANQPQVQNN
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctacagcttgtgacccctgcctcctcacccatggggcccttcttcggtctc
ccgtggcaacaggaagcgatccatgacaacatatacacaccgaggaaatatcaggttgaa
cttcttgaagcagctcttgaacacaatactatagtctgcttgaacactggctcagggaag
acctttatcgcagtgctcctaatcaaggaactctcccatcaaatccgtggagaggatgga
aggagaacaattttcctggttaatgcagcgtcatctgtggttcagcaagcatctactgtc
agaacccactccgatctcaaggtcggcgactacaagtcagaggaaatgacatcatggccc
gaggagatgtggaccagagagatgatggagaatcaggtgctggtgatgacttgtcacata
ttcctgcatgtattaaggacaggagtcttgccactatcaaaaatcaacctgctggttttt
gatgaatgccaccttgcaatcacagaccatccttatcgggaaataatgaagatttgtgag
ggctgtccaggctgtccccgcattctgggtctgaccgcttccattttaaatggaaaatgt
gacccatgtgtcctggagcaaaagattcagaacttggagaagattctgcagagcaatgca
gaaactgccactgatcttgtggtgctggataggtatgccacccagcctcgtgaggtggtg
ctggattgtgggctgtaccgggatgaaagcggtctctctgagagactcctgagcgagctg
gatgaagcccttcattttcttaatgactgcaacttaactgcttatcgtgaagatcgagat
ccaacattcatctccaaacaggtgctgaatgactgtcgagccgttctggacgtgctgggc
ccgtggtgcgctgataaagcggcaggaattatggtccgcgagctgcagaaatacatcaaa
cacgagcaggaggagctgaatcgtaaattcctgctgttcacggacaccattctgagaaaa
atccatgccttgtgtgaggagcatttctccccagcttcgctggacctgaagttcgtcact
cccaaagtcatccgacttctggagatcctccacgagtacaaacctttcgagcggcagcag
ttcgagagcgtggagtggtacaacaatcgcaatcaggacaattatgtttcatggagcgat
tccgaggatgaagatgaggatgaggaggtagaggcgaaggagaagccagaggctaatttc
ccctcacccttcaccaacatcctctgtggaatcatctttgtggaaaggagatacacagcg
gttgttttaaacagacttataaaggaggcaggcaagcaggaccctgagctggcctacatc
agtagcaacttcatcacaggtcacagcattggcaagaatcaacctcgcaacaaacaaatg
gaggtggagttcagaaaacaagaagaggtcctgaggaagttcagagcccacgaaaccaac
ttgctcatcgcaaccagcattgtggaggaaggggtcgacattccaaagtgcaatttggtc
gttcggtttgacttgcccacggagtacagatcgtacgtgcaatccaaaggtcgtgcccgt
gctccggtctccaactacatcatgttagcagacagcgaacggacaaagtcattcgaagag
gacctaaaaacctacaaggccatagagaagattctcagaaataagtgttcgaagtcagcg
gaatgcagtgaattggagccggtgaatgatgacgacaacgttctcccaccttacgtcttg
cggtcggaggacggcggcccccgcgtcacgattaacacagccattggacacgtcaacaga
tactgtgcacgtttgcccagtgacccgtttactcacctcgctccaaagtgtaaaaccctg
gagctgaaggccaccggttatcaatcgatactattccttcccatcaactctccactaaga
gttcctgtccctggtccaataatgaactgtgcaagacttgctgaaaaagccgtcgctctt
ctctgttgtgaaaaattgcacaaaattggcgagctggatgatcatttaatgcctgtgggg
aaggaaactgtgaagtatgaggaggagctggacctgcatgatgaagaggagactaacgtg
ccaggaagaccaggctccaccaaacggagacagtgttacccaaaagccataccagagtgt
ctgcggggttgttatcccgtacctgagcagccttgctatttgtatgtgatcgggatggtc
ctcaccacccctcttccggacgagcttaactttcgccggagaaaattgtacccacctgaa
gacaccaccagatgttttggcattctgacagctaaaccaatacctcggatccctcacttc
cccgtctacacacgttccggtgaggtgaccatctcgatcgagctgcaaaagtccggcttc
actctgagcgcggaacagctggagttgatcactcgcctgcaccagtacatcttctctcac
atcctccgtctggaaaagccggcgctggagttcaaacccaccgaggcggattctgcctac
tgcgttctacctctcaacatcgttgaggattccaatacgctggacctggatttcaagttc
atggaagagattgagaagtccgaagcacgcatcggcattccaaacacaaagtacaccaag
caaaacccatttgttttcaaattggaagattaccaagatgcagtcatcattccaaggtat
cgtaatttcgaccagccgcaccgcttttacgtagctgacgtttacacagacctcaccccg
ctcagtaaatttccatccccggagtacgagactttcgctgagtactacaaaactaagtac
gacctcgacctctccaacgttaaccagcctctgttggatgtggaccacacatcttcaaga
ttgaatcttttaactccacggcaccttaatcagaaggggaaagcccttcctcttagcagc
gccgagaagagaaaggccaagtgggaaagcctgcaaaacaaacagattttagttccggag
ctctgtgccattcaccctatccccgcctcgttgtggaggaaagccgtctgccttcccagc
atcctctatagacttcactgccttctgacggccgaagagctgcggtctcagacagccatc
gatgctggggtaggatctcagaccctgcctcctgacttcaggtatcctaatttggatttc
ggatggaagaaatccatcgacagcaagtctttcatttcctgtccaagcgcatgtatggac
aacaacgatcactgtaagcacgacacaagctcagattcagaccacactgcctgcagcaca
gaggcctcccagcctccagagggcgctctcccctgtaaaaactgcaacacaccagatgaa
aagctagaaaatgtgctccctgtgactgatctccagacaccgaaccaagacgagggcgcc
aggatctgttccaggaacatccctaacggcactcggggcgatgacgacctttcgcactca
cgtgacatttgccaatgctctcagcccggctcggagagcgacctatcgacgcaaaccact
acctcagttcaagcgcgtctctctccagccagcgagccacagccccggcccggtgatgaa
tgtaccccaggcgggaactcggatctctgcgacggacatgtgaaaaaacctacctcatac
tgttgccccaaaccagatacggcaaccagcaccacagcaccttctaccgtgtcttcagag
atctcaggcgtgacgtcagcatccgcctgtgagcccccgtcttgggattctccgaagatg
ttgggcccaaatcctggccttatcttgcaggctctgaccctctcaaatgccagtgatggc
ttcaatctggagaggttggagatgctgggtgactcttttctgaaacatggcatcaccacc
tacctgttctgcacatatccggatgcccacgagggccggctttcgtacatgagaagcaag
aaggtcagcaactgtaacctttatcgtctgggaaagaaaaaaggcctccccagccgaatg
gtggtctccatctttgacccccctgtaaactggcttcctccaggctacgtcgtgaatcag
gacaaaagcagcacagacaagtgggactcagatgagaataaggatttggccaatggaaaa
gccagcgaggatgaggatgatgatgaggatgatgatggagttgtcgaggacgagccaccc
aaggaagaggtgaacacagaggaggatgatttggaatattacgatgaacacatcaagttc
atcgataacatgctgatgggctcaggagccttcggaaagaaaatctctctccagccgccc
gaaccctggtatgagtggaaagcacccaagaaagcccaccacgcccatttcgccccagag
ggtgccgctgacgagtttgactacagttcctgggatgccatgtgctaccttgaccccagc
aaagcgggcgaggaggacgacttcgtggtcggcttctggaacccttcagaggaaaactgt
ggcacagatattggaaagcagtccatatcctatgacctccacactgagcagtgcatcgct
gataagagcatagccgactgtgtggaagccctgctggggtgctacctcactagctgcggg
gagcgtgcggcccagctgttcctctgctccctcgggctgaaggttctgccggtggagcaa
gagagttccgggcgttcggccgagctgcagtacggcaggcttaagattcctccccgctgc
atttttgagcaccctgatgccgaacgcaccctcaaccatcttatttcgggctttgagaac
tttgagagaaagattagctacacgtttaaaaaccaggcttatcttctgcaggcgtttacg
cacgcctcgtatcattacaacaccattacagattgttatcagcggttggagttccttggt
gatgcaattttagactacctcataactaagcacctttacgaagacccacggcagcactcc
ccgggcgttctgaccgacctgcgttctgcacttgtcaacaacaccatattcgcttccctg
gccgtcaagtacgattaccacaagtacttcaaagcggtatcgcccgaactgttccacgtg
atcgacgattttgtgcaatttcagctggagaaaaacgaaatgcaaggaatggattcggag
cttcgcagatcggaggaagacgaggagaaggaggaagatatcgaggtccccaaagcaatg
ggtgacatcttcgaatcgctagccggtgcaatttacatggatagtggcatgtcacttgag
acagtttggcaagtgtattatccaatgatgaggccactcatagaaaaattctctgctaat
gtccctcggtccccggtgcgtgaactcctggagatggaaccagagacagcaaagttcagc
cccgccgagagaacctacgatggaaaagtacgggtcacagtggaggtggtggggaaaggc
aagtttaagggtgtgggccgcagctaccggatagccaagtcagcggccgcccgacgagct
ctgcgcagcctcaaagccaatcaacctcaggtccaaaacaactga
DBGET
integrated database retrieval system
