Triplophysa dalaica: 130437143
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Entry
130437143 CDS
T09616
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130437143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdw03009
]
130437143
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
Pre-60S particles
RNases
130437143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
130437143
NCBI-ProteinID:
XP_056624307
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All DBs
Position
2:420356..428595
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AA seq
717 aa
AA seq
DB search
MKRKAQESVMMSREKKRVRLENISQDVLTVRDLCGLIQFSTLRPTHNIVKPSWFSVSGDD
GVSRVNVMILDGLTQTHFYRYFTHFKHLSNKYTARWSLAPSSGDLMSDLLNSDVTQSVEH
LKISARLMLNPVIRRFGLKASGLNAFLLNERDMIKHNFPVKGGRDCEGFVCTQSDGPVTD
SSPLFGLDCEMCCTCAGLELTRVALVDCTGQCVLNELVKPHNPIIDYHTRFSGITSLMLN
PVKTRLTDVQCQILKLLPPDGVLVGHSLENDLRALHLIHHHVIDTSLLYRKEFGQRFKLK
HLAEVILKREIQSEDRMGHDPCEDALAALHLAQYFISKGPREVVQDHMEDLWEMEFCGDS
DSNTPHSSSPLPFGHALYTSGKSALYLSTTADDTDSLTNQHVCRRQHCTTNREVVCVFRR
VVQSYTLSVLQFSHSENLQQTPAQRQQHLQQMSVCLREMCVLYVGPWPSDTTVKQIHKLF
RCCGRVRTVRFLHNTHGIHAEVVFDHLEGAQLAVNHLTDHHISDCHIKARRPVHEWCLDL
DERVSERQRDILTHHMIYVCNLSSKHHHHDDLLHTFKQFGPIQHIIRPAKHAGKRHCRHA
FISFERSESAHAAVGVALQMGNRKLSVCHALTPPHMTSWTHAQAVVTETSPETAGQREGC
DPHQMERHIQKLDGKVGKVFGALEKNCMSIVILPGVRSASVDYLGLCFIHIKRDDTI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaagcacaggagagtgtgatgatgtcacgtgagaagaagagagtcagactg
gagaacatctcacaggatgtgctgacggtgagagatctgtgcggtctgatccagttctcc
acgctcagacccactcacaacatcgtgaagcccagctggttcagcgtcagtggtgatgat
ggagtctctcgggttaatgtgatgattctggacggactcacacagactcacttctacaga
tacttcacgcacttcaaacacctaagcaacaaatacactgctagatggagtctagcgccc
tcctcaggtgacctgatgtctgatctactcaactctgatgtcacacaatctgtagaacac
cttaagatctcagctcggctcatgctgaatccagtcatccgtcggtttggtctgaaagct
tcagggctgaacgcttttctgctgaacgagcgggacatgatcaaacacaacttccctgtg
aagggtgggcgggactgcgagggcttcgtgtgcactcagagcgacgggccggtgactgac
agcagccctctgtttggactggactgtgaaatgtgttgtacttgcgctggtctggagtta
actcgagtggctctggtagactgcactggacagtgtgtacttaatgaactagttaaacca
cacaaccctataatagactaccacaccaggttttctgggatcacgagtttgatgctgaac
cctgtaaaaactcgactgacagacgttcagtgtcaaatcctgaagctgttgcctcctgac
ggcgttctggtgggtcactcgctggagaacgacctgcgggccctacacctgatacaccat
cacgtcatcgacacgtctctgctgtaccgcaaagagttcggtcagaggtttaaactcaaa
cacttagctgaagtgattctcaaaagagagattcagtcagaagacaggatgggtcatgac
ccctgtgaggacgctttagccgctcttcatctggctcaatacttcatcagtaaaggaccc
agagaggttgtgcaggatcatatggaggatttgtgggagatggagttctgtggtgacagt
gactcaaacactcctcacagcagcagccccctccccttcggacacgccctctacacatcc
ggcaaatcagcactctacctgagcacaacagcagatgacacagactcactgaccaatcaa
catgtgtgcagaagacaacactgcacaactaacagagaggtggtgtgtgtgttcaggcgt
gtggttcagtcttacacactcagtgttcttcagttctcacacagtgaaaatctacaacaa
acaccagcacaaagacaacaacatctacagcagatgagtgtgtgtttgagagagatgtgt
gtgttgtacgtcgggccgtggcccagtgatacaacagtgaaacagatacacaaactcttc
agatgctgcggtcgcgtgcggacggtacgattcctgcacaacacacatgggattcacgct
gaggtagtgtttgatcatcttgaaggcgctcagctggctgtcaatcatctgacggatcat
cacatcagtgactgtcacatcaaggctcgtcgtccagtacacgagtggtgtttggatctg
gatgagcgcgtctctgaacgtcagcgtgatattctcacccatcacatgatctatgtgtgt
aatctgtcctctaaacatcatcaccatgacgacctgctgcacaccttcaaacagtttggc
cccattcaacacatcatcagacctgcaaagcatgctgggaaacgccactgcagacacgcc
ttcatctcgtttgagcgcagtgagagtgctcatgcagcagtgggcgtcgccctgcagatg
ggcaacaggaagttatcggtgtgtcacgctctgaccccgccccacatgacctcatggaca
cacgcgcaggccgtagttacagaaaccagcccggaaacagcggggcagagagagggatgt
gatccgcatcagatggagcgtcacatacagaaactggatggcaaggtgggaaaagtgttt
ggagcgttggagaagaactgcatgagcatcgtcatcctgccgggagtcaggagcgcttct
gtggattatcttggcttgtgctttattcacatcaaacgtgacgacaccatctag
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