Triplophysa dalaica: 130437224
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Entry
130437224 CDS
T09616
Symbol
vsx1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130437224 (vsx1)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130437224 (vsx1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130437224
NCBI-ProteinID:
XP_056624444
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Position
15:complement(5631037..5632864)
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AA seq
340 aa
AA seq
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MTGRDEATDEKPKLKLYPSFGIDKSRFNGSGFRSKGFAITDLLGLESELQPHQSAPGAGA
NGEAQSAGVGGFSFSGGSLPLGLGFLCSLAAQQPPGAPCFLPSHIPLLHSRTESHFMQNL
EQHRDAYSDDECLSGDRNDGKNSGNSQKRKKRRHRTVFTSHQLEELEKAFHEAHYPDVYA
REMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESII
NSAKNGMMGSCAPWLLGMHKKTLEITKKAPGTPDSTHSDSFSEEHKEKDSDATWSTGGNG
ADNSEDMAIDLSSTSKQESKCTLKSSPAHTEPSSESENES
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaagagacgaggcaacagatgaaaaacctaaactaaaactttatccttcattc
ggaatcgacaaatcacgttttaacggatctggatttaggtccaaagggtttgccatcaca
gatctactcggtctggagtcggaacttcagccccatcagtccgctcccggagcaggcgcc
aatggagaagcgcagagcgcgggagttggagggttttctttctctggaggctcattgcca
ctcgggttaggttttctatgcagtttagcggcacaacaacctcccggggcaccgtgtttt
ctcccgagccatataccgctgctgcattcgaggacagagagccactttatgcagaatttg
gagcaacatcgggacgcatattctgatgacgaatgtctttctggggatcgcaacgatggg
aaaaactcagggaattctcaaaagaggaaaaaaagaaggcacagaacagtgttcacttca
catcagcttgaggagctagagaaagccttccacgaagcgcactatccagatgtttacgca
cgagaaatgctggctatgaagacagaactgccagaggacagaatacaggtgtggttccaa
aaccgccgcgccaagtggaggaaaagggagaagtgctggggtcgcagcagcgtcatggct
gaatacggactttatggtgccatggttcgtcactctatcccccttccagaatccatcata
aactccgccaagaatgggatgatgggctcgtgcgctccctggctgctaggtatgcacaaa
aaaactttggaaatcacgaaaaaagcccccggcacacctgactcgacacattccgattcg
ttttcagaggaacacaaagagaaagacagcgacgccacgtggtcgacaggaggcaatggc
gcagacaactctgaagatatggcgatagatttgtccagcacttcgaaacaagagagcaaa
tgcactttgaaaagctcaccagctcacacagaacccagcagtgaatctgagaacgagagt
taa
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