Triplophysa dalaica: 130437302
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Entry
130437302 CDS
T09616
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130437302
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130437302
BRITE hierarchy
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
130437302
NCBI-ProteinID:
XP_056624583
EnsemblRapid:
ENSTDLG00000019971
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All DBs
Position
15:1194283..1419304
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AA seq
997 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAAGGGAGGGMPAASRVPVSTNGNPQNVQGLTSYQQSSVLWDGS
GADDVKSFSTFLHSEPYWERSANASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAA
RSRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG
PPPNTSVKAIGSQRRRSPGVVAAEIFEPHLGSHILQSLDAFVFALNKEGRFLYISETVSI
YLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQSAGAEDGASSASSSSHS
ETPEPVESSSPSLLSPDNTLERSFFIRMKSTLTKRGIHIKSSGYKVIHITGSLRIRMALT
HSRSVPNQIMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLNIIYCENRISDYMDLTPV
DIVGKRCYHFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKTGGYIWIQSSATIAINAK
NGNEKNIIWVNYVLSNLEYKDIPIDIAQLPSLPEKTSESSETSDSESESKENSDNENSKS
GGKGNPSSENSEDPESDSKKQTGEPPEQEMRRQEEGDSSSNPESQDSEDSLEPSDCETDH
KEGHLGRLGGLHIKVERYGEVEELRDSPSSSSSEEEEDDEDEIVKECNSAGELSGPAMSR
HQKRKKRRKKQRWDRSRQRLRLSPSATATPSPSGMDPTLGDQPPLLLPPSPTSASVLKIK
TEMSEPINFDNDSSIWNYPPNREISRNESPYSMTKPHDTFPSPQPGGPHVSIPESVLTPP
GAESGGGSRKPNFNGNGSSGNNAPTAVSSATPGSLALPSSSSTADPLSPPLSASPRDKQQ
GTPTSSGSLLYTSDLEALQRLQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPAD
VSLAMQGNLLPNPHAAVNFVDGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGAGLTQ
MPAANVFTTAEGLFSTLPFPVYTNGIHNTQTLERKED
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcagcggcggcggctgcaggt
gggggagccggtggagggatgccggctgcgtccagagtcccggtatctaccaacggaaac
ccgcaaaacgtccaaggcttgacctcttaccaacaaagcagtgtgttatgggatgggtca
ggggctgatgacgttaagagcttttccacgtttctccacagcgagccatactgggagagg
tctgctaatgccagttcctgctctgccactaggcccaagacactccaccttggagggcaa
caacatacctcatcgccatggttgcaggctctgaggaaggagaagtcacgtgacgccgcc
cgctcgcgccggggcaaggagaactttgagttctatgagctggcgaagatgcttcctctt
cccggcgccatcaccagccaactggacaaggcgtccatcattcgtctcaccatcagctac
cttaaaatgagggacttcgccaaccagggagacccgccgtggaacctgcgaatggaagga
ccgccacccaacacctcagtgaaagctatcgggtcccagcggaggcggagccctggcgtt
gttgccgcggagatctttgagcctcaccttggaagccacatcctgcagtccctggatgca
tttgtatttgcactaaacaaggagggaagatttttgtacatctccgagacggtgtccata
tacctggggctttcacaggtagagctgacgggcagcagcgtgttcgattacgttcatccg
ggcgatcacgtggagatggccgagcagctgggaatgaagttaccgccgggaagaggactg
ttgtctcagagcgcgggggccgaggacggggctagctccgcctcctcatcttctcattct
gaaacacctgagccagtggagtccagcagtcccagtcttctgtctccagataacactctg
gaacgttccttcttcatccgaatgaagtccacgctaaccaagagaggcatccatattaag
tcttctggatacaaggtgattcacatcacgggcagcttgaggataagaatggcattaacg
cacagtcgttcggtacccaatcagatcatgggcatggttgtggtcgcacacgcgctccct
ccgcccaccatcaacgaggttcggatcgactgtcagatgtttgttacgcgggtcaacatg
gatctcaatatcatctactgtgaaaacagaatcagcgactacatggacctgacacctgtc
gacatcgtcgggaagagatgttatcacttcattcacgcagaggacgtggaaggcatccgg
caaagccatttagacctaatgaataagggacagtgtgtgacgaagtactatcgctggatt
caaaagaccggaggttatatctggatccagtccagcgccactattgcaatcaatgccaag
aatggcaacgagaaaaacataatctgggtcaactatgttcttagtaatctggagtacaaa
gatatacccatagatatcgcacagctgcccagcctgccggagaaaacatcggagtcttcg
gaaacatctgattcagaatcagagtccaaggagaactcagacaatgaaaactccaagtca
ggtgggaaaggaaacccgtcttccgagaacagcgaggaccccgagtcggacagtaagaaa
cagacgggcgagccgccagagcaggagatgagacgacaggaggaaggagacagttccagc
aatccagaaagtcaagacagcgaagacagcctggaaccatccgactgtgaaacagaccac
aaggaaggacacttgggtcgactgggcggcttacacataaaggtggagcgctacggcgag
gtagaagaactgcgggactcgccctcctcttcctcttcggaggaagaagaggacgatgag
gacgagatcgtaaaggaatgcaacagcgcaggagagcttagcggaccggcaatgagccga
caccaaaagagaaagaagagaaggaaaaagcagaggtgggacagaagtcggcagcggctg
cgtctgtcgccctcggccaccgccactcccagccccagcggcatggaccccaccctcgga
gaccagcctccccttctgctcccgccctccccgaccagtgcctccgtgctaaagatcaag
accgagatgtcggagccgataaactttgacaacgacagcagcatctggaactacccgccc
aaccgagagatctcccgcaacgaatccccctacagcatgacgaaaccccacgacaccttc
ccttccccccagcctggcggtccgcacgtgtccattcctgagtctgtcctcactccacct
ggtgccgagagcggaggaggcagcagaaagcccaacttcaacggcaacggtagcagcggc
aacaacgcccccaccgctgtgtccagcgcaaccccgggcagcctggctcttccttccagt
tcctccacggctgaccccctctccccaccactgtcggcctcgccgcgggacaagcagcag
ggcacgcccacctcttccggctccctgctctacaccagtgaccttgaagccctgcagagg
ttacaagcaggtaacgtggtgctcccattggtgcacagagtcactggcacgctcgccgcc
accagcacggcctccccacgagtctacaccactggaaccattcgatacgccccggcagac
gtcagcctggcaatgcagggcaacctcttgcctaacccccacgctgctgtaaactttgtg
gacgggccaggtttcggcatagaccccaagacacccatggagatgctataccaccacgtg
caccggctcaacatgtccacgcccttcggtggagcggtcagcggagccgggctgacgcag
atgcccgctgctaacgtcttcaccacggcagaaggactcttctccacgcttccgttcccg
gtctacaccaacggcatccacaacacacagactctggagcgcaaggaggattga
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