KEGG   Triplophysa dalaica: 130437565
Entry
130437565         CDS       T09616                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
tdw  Triplophysa dalaica
Pathway
tdw03420  Nucleotide excision repair
tdw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130437565 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130437565 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdw04121]
    130437565 (cul4b)
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130437565 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tdw04147]
    130437565 (cul4b)
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     130437565 (cul4b)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      130437565 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      130437565 (cul4b)
Exosome [BR:tdw04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   130437565 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 130437565
NCBI-ProteinID: XP_056624894
LinkDB
Position
16:complement(10893710..10901689)
AA seq 859 aa
MFPTGLPSPNPPSPAQEPRPAASDVHNDSSLTSSKKRKIHSSEKEDIDSISSSPKAICNS
SSTTSCSSTTSQQHNKKLRFEDSVDFIGLDVKMAEESSNPSASCSKAKNVFLPGGVGHHA
NGLTKTAGSSTFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTSIK
YNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKCWQ
DHCRQMIMVRSIFLFLDRTYVLQNSMLPSIWDMGLELFRSYIISDLKVQSKTIAGILLLI
ERERSGEAVDRTLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYL
HHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAILQKGLNNLLDENRIEDLS
LLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICF
MKNEKFVNGMKEAFETYINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIF
RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMEL
SKDIMVQFKQHIQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLG
KHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMYNEGEEFSLEDIKLATGIE
DGELRRTLQSLACGKARVLMKTPKSKDVEDGDKFLCNDDFKHKLFRIKINQIQMKETVEE
QASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLI
DRDYMERDKENPNQYNYVA
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctaatcccccatcgccagcccaagagcccagaccc
gcagcttccgatgttcacaacgacagtagtttaacgtcttctaagaagagaaaaattcac
agttccgagaaagaagacattgattcaatatcttcgtctccgaaagccatttgcaattca
tcctccaccacgtcctgctcttccacgacttcgcagcaacacaacaagaagttgagattt
gaggactcggtggatttcatcggactggatgtgaagatggccgaggagtcgagtaaccct
tctgcgtcttgttctaaggcaaaaaacgtgttcctgcccggaggtgtggggcatcatgcg
aacggactcaccaagactgcgggctcctctacattctcaaacagtaaacccggtgctgca
aagaaacttgttatcaagaactttaaagaaaagccaaaattaccagagaattacacaaat
gagacctggcagaagctaaaggaggcggtggaagccatacagaacagcacttcaataaaa
tacaaccttgaagagctttatcaggctgttgaaaacctgtgttcacataagatatctgcc
aagctctataaacagctcagagtggtttgtgaagaccatatcaaggcccagattgaccag
ttcagagaggatgctctagacagtgttctctttctgaagaaaatagacaaatgttggcaa
gatcactgcagacaaatgattatggtaagaagtatatttttgtttttggatcgcacatac
gttttacaaaattcaatgctgccctcaatctgggatatgggtttggagttgtttcgttcc
tatatcatcagcgacctaaaggtgcaaagtaagacaatcgccgggattctgcttcttatt
gagagagagcggagtggggaggccgtagaccgtactctcttgaggagtcttttgagcatg
ctgtcagatctgcagatatatcaggattcatttgagcagcgttttctggaagagacaaat
cgactgtatgctgcagagggccagaggctcatgcaggagagagaggtgccagaatatctc
catcatgttaataaacgtctagaagaggaggctgacagagtcatcacatacttggatcag
agcacacaaaaacccctcattgccacagtagaaaagcaactacttggagaacatcttaca
gcaatactacagaaaggtttgaataacctgctggatgagaaccgtattgaggatctgtct
ctgctgtatcagctcttcagtcgtgtcaggggtggcgtgcaggttctcctgcaacattgg
atagagtacatcaaggcatttggaagcacaatagtcatcaacccagagaaagacaagacg
atggtacaggagcttctggatttcaaggataaagtcgatcacatcattgacatatgcttc
atgaagaatgagaagtttgtgaatggcatgaaggaggcgtttgagacctatatcaacaaa
cggccaaacaaacctgccgagctcatagcaaaatatgtggattcaaagcttcgtgcagga
aacaaggaagcaaccgatgaggaacttgagaaaatgttggacaagataatgatcatattc
aggttcatttatggcaaagatgttttcgaggcattctacaagaaagatttagcgaagagg
ttactggtgggaaagagtgcttctgtagatgcggaaaaatcaatgttgtccaaactgaag
catgaatgcggagctgcatttaccagtaagctggaaggaatgttcaaagacatggagctt
tcaaaagacattatggtccagttcaaacagcacattcaatgtcaaaatattcctgggaac
attgagctgacagtgaacattctcacaatgggttattggccaacttacgtccccatggaa
gtgcatctcccaccggagatggtgaaactccaggagattttcaagacgttttacctgggc
aaacacagtggaaggaagctacagtggcagtcaacattaggacactgtgtgcttaaggca
gaatttaaagagggcaagaaagagctccaggtgtcactgtttcagacattagttctgctt
atgtataatgaaggggaggagttttctctggaggacataaagctggctacaggcatcgag
gacggcgagctgaggcggaccctgcagtcactagcctgcggaaaagcacgtgttcttatg
aaaaccccaaagagcaaagatgtggaagacggagacaagttcttatgtaacgatgatttc
aaacacaaactcttcaggattaaaatcaaccagatccaaatgaaagaaacggtggaagag
caggccagcactacagagagagtattccaagaccgtcagtaccaaatcgacgctgccatc
gttcgaatcatgaagatgaggaagactctcagccataatcttctggtgtctgaggtgtac
aaccaactcaaattcccagtcaagcctgctgatctaaagaagaggatagagtcacttatt
gacagggactacatggaaagggataaggaaaatcccaatcaatacaactatgtggcttaa

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