Triplophysa dalaica: 130437593
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Entry
130437593 CDS
T09616
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130437593 (rnf20)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130437593 (rnf20)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
130437593 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
KASH_CCD
BRE1
zf-RING_5
Prefoldin_2
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
130437593
NCBI-ProteinID:
XP_056624938
LinkDB
All DBs
Position
16:19750751..19759571
Genome browser
AA seq
1009 aa
AA seq
DB search
MSGQKRSCDPSGSVALGAPPEKKKGGEDGEGMSTGSGGTTAVETVIKLGGGSNLEEQDIK
ALQIKNRKLGEALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQFDENVKLIAR
RNDQSGSEPVESQPPEGRSLKPDTPEPDGDSNPERAKDRGQGEGVSSFLATLASSSSEEI
EAALQERVESSCKQANRVVEIYENLKNTVDQLKKNLESGAGGSLWDVAVRLNTLLASENE
RLRQLTDGLQQKHSHMTSESRSLGRAANRADNRISELQALIEELQWDMEKIRRRENRLNT
HLAEVLERVNSTGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLGELQKLQQ
DLQTVYQENNNMKVELLSRAEEVARESAEYRCLQSQFSVLYNESLVLKSQLDETKARLNT
TRTARLRQLDHMENDEESLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGP
INREMRHLISTLQTHNQQMKGEVVKYKIRLRETQQELNQLRVAKGNAAIQSQSSTDVDVK
EETTSPSTPAPTSDVTVKTEPDSGSATPGTTGVTVKTEPGTETEAVVKDEEKEKEKEKEK
EKEKEKEQREKERVIRGGPGGGAVKEEREKAGSSSQSEDLVAERCTVIGGPKRKEIEQLK
IMRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEAEELRQRVRELEER
ERREGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNI
RLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEE
KERLLQGTISAAERELALRTQALEMNKRKAQESMSLSEDVRAQLEVVQQRLVAVRDEVVE
NSISREKESFNARRAQEDISKQRRKIEKAKKPAENIRNGDEILNEEINEYKARLTCPCCN
SRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccagaagcgctcttgtgaccccagtggctctgttgccctcggtgctcctcca
gagaagaagaagggtggtgaagatggagagggaatgagcactggatcaggaggaaccact
gctgtagaaacagtcattaaattgggtggaggttccaatttggaggaacaggatatcaaa
gctctgcagatcaaaaacagaaagttgggagaggcgctagaccaaagacaggtgatagag
gatgaactaagagaaagagtcgagagattagagacacgtcaggcgacagatgatgccagt
ttgttgattcttaacagatactggaaccagtttgatgaaaatgtgaagttaattgcacgt
cgcaatgaccaatcaggcagcgagcctgtggaaagccaaccccctgaagggcggagttta
aaaccagacacgccagaaccagatggagactcaaatccggagagagcaaaagacagaggt
cagggagagggtgtgagttcatttctggccacactggccagcagtagcagtgaggagata
gaggcggcgctacaggagcgagttgagtccagctgcaagcaggcaaaccgggtggttgaa
atctatgagaacctgaagaacacagtagatcagctgaagaagaacctggagtctggcgca
ggtggcagtctctgggatgtcgctgtccggctcaacacccttctggctagtgagaatgaa
cgtctccgtcagctgacagatggtctccagcagaagcatagtcacatgaccagcgagtcc
cgttcgttgggccgtgcggcaaaccgtgcagataatagaataagtgagctccaagctcta
atagaggagcttcagtgggacatggagaagatcagacgaagagaaaatcgcctcaacacg
caccttgcagaggtgctggagagggtgaacagtacaggctacaaagtgtgtggtgaagca
agcagtgtttgtggaactatcactatcaacaaaaggaagtttgaggagatgaacagtgag
ctggaggagaacagggagcttgcggagaatcggcttggtgaactccagaaactccaacaa
gacctgcagacggtttaccaggagaacaataacatgaaggtggagttgttgtccagggct
gaggaggtggccagagagagcgctgagtatcgctgtcttcagtctcagttctcagtgctc
tataatgagtctctagtgctgaaatctcagctggacgagaccaaagcacggcttaatacg
accaggactgcccgcctgcgccagcttgaccacatggagaatgatgaggaatcactgcag
cgtaaggtccgtactgaagtgattcaactggaggacacgttagcacaggtgcgaaaggag
tatgagatgctaaggatcgagtttgagcagacgctagctgctaatgaacaagcaggtcct
ataaaccgtgagatgcgacacctgatcagtaccctgcagactcataaccagcagatgaag
ggagaggtggttaaatataagattagactgagagagactcagcaggagctcaaccagctc
cgagttgccaaaggcaatgctgcaatccagtcgcagtcaagcacagacgtggatgtaaag
gaagagaccacctccccaagtacaccagccccgactagtgatgtcactgtgaagacggag
ccagatagcggctcggccacacccggtactactggtgtgacagttaagactgaaccaggt
acagaaacagaggctgtggtgaaagacgaggaaaaggagaaagaaaaagaaaaggagaaa
gagaaggaaaaggagaaagaacagagggaaaaagagagggtgatacggggtggtcccgga
ggcggagctgtgaaagaagagagagagaaagccggcagcagcagccagtctgaagaccta
gtggctgaacgctgcactgtgattggaggacccaaacgcaaggagatagagcagttgaaa
ataatgagggcggagcttaagaaagctcaagaatctcagagagagatgaagctgttgctg
gacatgtaccgctctgctccaaaagagcaacgagacaaagtacagctgatggcagcggag
aagaagacgaagtcagaggcagaggagctccgccagagggttcgagagctggaggagcgg
gagaggagagagggaaagaagatggccgatgaagaggctctgagaaagatccgttcagtg
gaggagcagatcgatattctcaataagaaactctctctcgctaaacaggaggaggacgcg
ctgctgagtgagatggatgttaccggccaggcgtttgaggacatgcaagagcagaacatt
cgtctgatgcagcagctccgagagaaggacgatgccaacttcaaactcatgagtgagcgc
atcaaatccaaccagatccacaaactccttaaggaggagaaagaggagctggccgaccag
ttgcttacactaaaaacacaggttgatgctcagctccaagttgtacgaaagctggaggag
aaagagcgcctcctgcagggcaccatcagcgctgcagagagggagcttgctctgcgtacg
caagcattagagatgaacaaacgcaaggcacaggagtcaatgtcgctgtctgaggacgtg
cgagctcagttggaagtggtgcagcagaggttggttgctgtccgagacgaggtggtcgaa
aacagcatctcccgtgagaaagaatccttcaatgcccggcgggcacaggaggatatatcc
aagcaacgcaggaaaatagaaaaggccaagaaacccgcagagaacattcgcaatggagac
gagatcctgaatgaggaaataaacgaatacaaggcccggttgacgtgtccatgctgcaat
tcacgtgtaaaggacgctgttttgaccaagtgcttccatgttttttgctttgagtgtgtg
aagacgcggtatgacacccgccagagaaaatgcccgaaatgcaatgctgcttttggtgcc
aacgacttccatcgcatctacatcggataa
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