Triplophysa dalaica: 130437606
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Entry
130437606 CDS
T09616
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw02010
ABC transporters
tdw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130437606 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130437606 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tdw02000
]
130437606 (abca1b)
Transporters [BR:
tdw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130437606 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
130437606
NCBI-ProteinID:
XP_056624973
LinkDB
All DBs
Position
16:complement(3648651..3679346)
Genome browser
AA seq
2281 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWLQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDR
SLDGFIELISAVKDMQLGSAGFKLKDFLRENETLSAFLRENASFTQHSVENILEAQVNLE
KVLIKGFGVHLKDMCSSAKLEDFVTISDEEVARRTQVIICSSSSTWLNQAESHFKSNLDF
LKPLRPDVRTNTSDVRQISKATDNLLESLGSLAAELASMRSWSDLRNEILFLTENATGSP
TMMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGNHNNSDDDPVPVYDNTSTPYCN
NMMKNMETNPISRMIWRALKPLLMGKILYTPHTPATQKIIHEVNKTFQELGILRDLGGMW
EETRPKVWHFMENSEEINLMRTLLRNNVTANFFSDKLAGTQWSVGDVVSFLSKHSEDTRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKLLNESLSLLDNRKFWAGIV
FLDITPNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DIIEHSIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLVSAGLLVLLLKMGNLLPYSDPGV
VFLFLVSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKV
IASLLSPVAFGFGCEYFALFEEQGIGIQWNNLFTSPMEEDDYNLTTCLLLMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGENNTNNTTVHGKKGNSGAVCIEEEPTHLEL
GVYIENLVKVYRHGRKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEEVKAEMEQILS
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKNAEAS
LSSCRNSSSTVSFVKKEDDTSESSSDAGLGSDQESEAATAIGTTWPESPVVPVDVSLITS
MILKHVTAARMVEDLGHEITYVLPYESAKNGAFVKLFHDLDDRLADLGISSYGVSDTTLE
EIFLKVAKDSGVDTEISDGTLPIRRRRQHAFGADHQSCLKPQTEDDNSDSNDSDADPEAK
ETDHLSVVDGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALV
FSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPDDISTQKLLGALMDDPGFGTRCMEGEP
VPDAPCTMGDEDWSTPEVPESVSDIFRMSNWTMDNPSPACECSSDGKKKMLPECPAGAGG
LSPPQIKISQMDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSTQ
VLPPAEEIDDAISRVRQIFQLKKNSGSAADRFLSSLSSFINGLDTKNNVKIWFNNKGWHS
IGAFLNVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICV
IFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWQANFLWDMCNYIVPATLVILIF
LCFQQKSYVSATNLPVLALLLLLYGFSITPLMYPASFLFKIPSTAYVVLTSVNILIGING
SISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADAMERFGEERFR
SPLEWDMVGKNLFAMAVEGVVFFVLTVLIQYRFFFKPKSFSAKLSPIGEEDEDVARERQR
IVNGNGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTG
DSTVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEEEV
CEVAEWGIRKLGLVKYVDKNAGSYSGGNMRKLSTAISLIGAPPVIFLDEPTTGMDPKARR
ALWDCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTI
ILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLSSSLTSLAHIFSILAKNKEFL
RIEDYSVSQTTLDQVFVNFAKDQSDDHCDSSVRRKETGVNMALLSPLSNVENIEKPKESF
V
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtttccactcagctgggtctgctgctgtggaagaactttacctacagaagaaga
caaacactacaactgctgacggagattgtgtggcctctatttattttcttcatcttgatt
tctgtgaggttgaactacccaccttatgaacaacatgaatgtcactttcccaacaaagcc
atgccctcagctggcaccctgccttggctccagggcattgtctgtaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggagttgttgggaacttcaatgactcc
ataatctcacgtctgttttctgatgccaagaagattttgctgtacagtcagaatgacagg
agcttagatggattcattgagcttatcagcgctgtaaaagacatgcaactggggtcggcc
ggtttcaagctgaaggacttcctacgggaaaatgagaccctgtccgcgttcctccgggag
aacgcctcctttacccagcattctgtagagaacattctggaagcacaggtgaatctggaa
aaggtcctgatcaaaggttttggtgtccatctgaaagatatgtgcagctccgccaagctt
gaagattttgtgaccatctcggatgaggaggtggctagacgcacacaggtcatcatctgc
tcatcttccagcacctggttaaaccaggctgagagccactttaagtcaaacctggatttc
cttaaacctctaaggccagatgtgaggacaaacaccagcgatgtccgtcaaatttcgaaa
gccacagacaaccttctggaaagtttgggatcactggctgcagagctggccagtatgaga
agctggagcgatctacgaaacgagatcttgtttctgacggaaaacgccacgggttcaccc
actatgatgtaccaggctgtgtctcgcatcgtctgtggacacccggagggcggcggcctc
aagatcaaatccctcaactggtacgaagacagcaacttccaggcactgttcggcaatcac
aacaacagcgatgatgatccggtccctgtttatgacaacacctccactccatattgtaac
aacatgatgaagaatatggaaaccaaccccatctctcgtatgatctggagagccttaaaa
cctcttctgatggggaagattctctacactccacatacacctgcaacacagaagatcatt
catgaggtcaataagacatttcaggagctcggaattcttagagatttaggaggaatgtgg
gaagaaaccaggccaaaggtttggcactttatggagaacagtgaagaaattaatctaatg
cggactctactacgaaacaacgtcactgcgaatttcttcagtgataagttggccggtacg
cagtggagtgtgggggatgttgtgagcttcttgtccaagcattctgaagacacacgaccc
catggaacggcattcacgtggagggatgtcttcaacgagacagaccaggccattatgagc
atatcccgtttcatggagtgtgtaaatttggataaactggaaccagtgagcacagaagag
aaactgttaaacgaatccctgagtctgctggataacagaaagttctgggctggaattgtg
tttctcgacataacccccaacagttcagagctccctccacacgtcaattacaagatccgc
atggacatcgacaatgtggaacgcacaaacaagattaaagatgggtattgggaccctggt
cccagggctgacccttttgaagatctccggtacatttggggaggattttcataccttcag
gatataatcgaacacagtattatcagagcacttactggctcaaaagagaagactggtgtc
tacatccaacagatgccatacccatgctatgtagatgacatttttctacggattatgagt
cgatccatgcctctcttcatgactctggcttggatgtactcggtggctatcatcatcaaa
ggtgtcgtctacgagaaggaggcccggctcaaggagaccatgaggattatgggattggac
aatggaatcttgtggctcagctggttcataagtagtttgattcctctactggtcagtgca
ggactgctggttcttctactcaagatgggtaatctcctgccatacagtgaccccggcgtt
gtcttcctcttcctcgtatcatttgccgtagtaaccatcatgcagtgcttcctcatcagt
acggcgttcgctcgtgctaacctggcagccgcctgcgggggcattatatacttcaccctt
tatctgccttatgtactctgcgtggcttggcaagactacgtgggcttcactgccaaagtc
atcgccagcttgctgtctcccgtggcctttggctttggttgtgaatatttcgctctgttt
gaggagcaagggattggcattcaatggaacaacctcttcaccagcccaatggaagaagat
gactacaacctcaccacctgcctcttactcatgtactttgatgccttcttgtatggcgtc
atgacctggtacatagaggctgtgttcccgggacagtatggcattcccaggccctggtac
ttcccgttcactaaatcctactggtttggagagaacaacacaaataataccactgttcat
ggaaagaagggcaattctggagccgtttgcattgaagaggaacctactcaccttgagctt
ggagtttacattgagaatctagtgaaggtgtatcgtcacggcaggaagttggcggtggac
ggtttgacgctcggcttctatgaggggcagataacctcattcctcggccacaacggtgct
ggaaaaaccacaacaatgtcgattctgacgggcctcttccctccgacctccggcaccgct
tacatcatggggaaagacatccgctcagagctgagctccatcagacagagcctcggtgtg
tgtccacaacacaacgtcctcttcagcatgttgacagtggaggagcatatctggttctac
gcccgtctgaagggtctgtcagaggaggaggtgaaggctgagatggagcagatcttgagc
gacaccggccttccacataaacgcaaatcgaggacaagtcagttgtcaggtggtatgcaa
aggaaactctccgtagcccttgcgttcgttggtgggtcaaaggtggtcattctggacgag
ccgaccgctggtgtggacccgtacgctcgcagaggcatctgggaccttcttcttaagtat
cgtgcaggtcgtaccatcctcctttccacccatcacatggatgaggcggacattctgggc
gatcgcattgccatcatctcccatggaaagctttgctgcgtgggctcctctctctttctg
aagacgcatctgggaacgggatactatcttactctggtgaagaagaacgcagaagcttct
ctcagctcctgcagaaactcaagcagcactgtgtcttttgttaaaaaagaagacgataca
tcagagagcagttcagatgctggtcttggaagcgaccaggagagcgaagccgccacagcg
atcggaactacatggcctgaatctcccgtcgttcctgtagatgtgtccctcatcaccagt
atgatcctcaagcacgttactgctgcccgaatggtggaggatcttggtcacgagatcaca
tatgtgttgccgtacgagtctgccaaaaatggtgcttttgttaaactcttccacgacctg
gacgaccgcctcgctgacctgggcatttcaagctatggagtttcagacaccacacttgaa
gagattttccttaaagtggcaaaagatagcggggttgacacagaaatctctgatggaact
ttgccgatacgcagacgcagacaacatgcatttggtgcggaccatcagagctgcctcaaa
ccccagactgaagatgacaattctgacagcaacgattctgatgctgacccagaagccaaa
gagaccgatcatttgagtgttgtggacggtaaaggatcatatcaagtgaagggatggagt
ctaaagaggcagcagtttgtggctttattatggaaaagatttctttacgctcgtcggtca
aggaaaggcttctttgcgcagattgttcttcctgctgtgtttgtatgcatcgcccttgtc
ttcagtcttatcgttcccccttttggaaaatatcccagtctggctctgaatccatggatg
tatgaggagcaattcactttcatcagtgatgatgcacctgatgacataagcacacaaaaa
ttactgggagctttaatggatgaccctggttttggaacacgatgcatggaaggagaaccc
gttcctgacgcaccttgtacgatgggcgacgaggactggtccactccagaagttccagag
agcgtttctgacattttccggatgtcaaactggaccatggacaatccgtctcctgcttgc
gagtgcagcagtgatggcaagaagaagatgctcccagaatgccccgcaggggccggtgga
ctttcacctccacagattaagatcagccaaatggatacccttcaaaatctgacagggcga
aacatctcagactaccttgtgaaaacctacgcgcagatcattgggaagagcttaaagaac
aaaatctgggtgaacgaattcaggtacggaggattttcactgggcgcgagaagcactcag
gtcctaccgcccgctgaagagattgatgatgcaatctctcgggtcaggcagatctttcag
ctgaaaaagaactcaggctcggcagcagaccgtttcttgagcagtctgtcttcctttatc
aatgggctggacaccaaaaataatgtcaagatatggttcaataacaagggctggcacagt
attggagcttttctaaatgttatgaacaacggtatcttgcgtgccaatttaccacctggt
aaagacccccgtcagtttggcatcactgcatttaaccatccgctcaatctaaccaaggag
cagctctctcaagtcgcgctaatgactacctctgtggatgtgttggtgtccatctgcgtg
atcttcgccatgtccttcgttcccgccagcttcgtggtcttcctcattcaggagcgagtg
aataaggccaagcacatgcagtttatcagtggagttcagccgtacctttactggcaggcc
aactttctctgggatatgtgcaattacattgttcccgctactctggtcatcttgatcttt
ctctgcttccaacaaaaatcatacgtgtctgccaccaacctgcccgtacttgctcttctc
ctccttctctatggattttccatcactcctctcatgtacccagcgtccttcttattcaaa
atccccagcacagcttacgtggttctcacaagcgtcaacattctcattgggatcaatggc
agcatctctactttcgtaatggagctgtttggaaataacgagatcggtggcattaatgac
atcctgaagaacgttttattgatcttcccccatttttgcctcgggcgaggtctcattgac
atggttaagaatcaagccatggctgacgcaatggagagatttggtgaggaacgtttccgt
tctccgctggagtgggacatggtgggcaagaatctatttgccatggcggtcgaaggagtc
gtcttcttcgtcttaactgtcctcatccaataccgtttcttctttaaacccaagtctttt
agtgccaagctgagtccgattggagaagaagatgaggatgttgccagagagaggcagagg
attgtcaacggaaatggtcaaggagacattctggaacttcgccaactcactaaggtgtat
aagaggaagcagaaacctgccgtggatcgtctctgtgttggcattcctccaggagagtgt
tttggtctgctcggtgtcaatggtgctggaaaaacaagtactttcaaaatgcttacgggt
gattctacggtgactaaaggcgaagctttcttagcagggaagagtattctcagagaaatt
gatgaagttcaccagaatatgggctactgccctcagtttgatgccattaatgacctcctg
actggacgagaacacctggaattctatgctattctgcgtggtgtacctgaggaggaagtt
tgtgaggtggcagaatggggaatccgtaaactgggtctcgtgaagtacgtggacaaaaac
gcaggaagctacagcggtggaaacatgcgcaaactctccacagccatatctctcatagga
gctcctccagtgatcttcctggatgaacccaccacaggcatggaccccaaagcccggcgg
gcgttgtgggactgcatccacagtgtcatcaaagagggccgctctgttgtgcttacctca
catagcatggaggaatgtgaagctctgtgcactagaatggccatcatggtgaatggccgg
ttccgctgtctgggcagcgtccaacacctgaagaacagatttggtgatggatacaccatc
attctgagggtcgccggtccagatcctgaccttcagcctgtaatgaagtttatcgagagc
gagctaccaggcagcactctgaaagagaaacatcgaaacatgctccagtaccagctctcc
tcatccctcacgtccctcgctcacatcttcagcatcctcgctaagaacaaagagttcctc
aggatagaagattattctgtgtcccagaccactctggaccaggtttttgttaactttgcc
aaagaccaaagtgacgatcactgtgacagctccgttcgtcgtaaagaaacgggggtcaac
atggcattactgagcccactgtctaatgtagagaatattgagaagccaaaagaaagcttt
gtgtga
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integrated database retrieval system
