Triplophysa dalaica: 130437753
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Entry
130437753 CDS
T09616
Symbol
si:ch211-114c17.1
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130437753 (si:ch211-114c17.1)
Spliceosome [BR:
tdw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130437753 (si:ch211-114c17.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
zf-C2H2_10
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
130437753
NCBI-ProteinID:
XP_056625287
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All DBs
Position
16:6296305..6300615
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AA seq
706 aa
AA seq
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MAAEGTEEPSNNGELTNPLGLHEPEVAEPSKPDVELSSESAGNEDLGAPAAPYTAEGQEE
EEGELPAEFEKLWKLTSENPLNFNTWTDLLQYCEQEGHLRASCQAFNAFLARYPLCYGYW
KKFADIERRAGRNIKAEEVCEQGLKVIPLSVDLWIHYINLLLGTLDMNLPESAHRIRCVF
EEAVASAGWDFHSDRLWDLYAEWEKEQGNLKAMTAIYDRVLRVPTQLYNAHYEKLKTHLT
SHPPLDFLSPEEYSMVRAEYKQTQIHAKKERSDIAANEEERPPGEEEPADDGKDSEEAVQ
KMQELILASREEVYQQNEAEVKKRWNFEDAIKRPYFHVKPMDRTQLKAWHSYLDWEMAEA
EMTSMDFEGTTVEGSEESKKDDVASHGRVLVLFERCLIACALYEEFWVKYIHYLEPRGVE
DVRNVYRRACGIHLPYKHSIHLQWSAFEEKHGNASEAQRILESLEMVLPGLSAVRLRRVG
LERRAGHLDVAESLXKESVQQSKDNPSLHAFYSIKLARFILKLYRNPSRARTVLQEAIEI
SPDNGRLYQNLMELEISGDVRANEGAVLQCVAKALAAPLSPKTKIHFSQRGLQFAEDFGS
TVQSLLSKYEDHQKLLKEHDGKRGAENGDSDDPEKMSKMDDGSATGVQTAPPTMAHMPMT
TPPPPMMGGDMSGSYGGYGSWYQQQYGGYGSYQNPWNQYNQYYPPS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaggcacagaggagcctagcaacaacggagagcttacaaatcctttaggg
ttgcatgagcctgaagttgcagaaccttctaaaccagatgttgagctgtcatcggagtct
gctgggaatgaagatttgggcgcccccgcagcaccttacacggcagaagggcaggaggag
gaagagggagagctgcctgctgaatttgagaaactttggaagctgaccagtgagaatcct
ttgaattttaatacctggacagatcttctgcagtattgtgaacaagagggccacctgaga
gcttcctgccaagctttcaatgcctttctggctaggtaccctttgtgctatggttactgg
aaaaagtttgcagatattgagagacgggcaggtcgtaacatcaaggctgaggaggtgtgt
gaacaaggtttgaaggtcattcctctcagtgttgatctctggattcactacatcaacctg
ctgctgggaacactcgacatgaatttgcctgagtcagcacatcgcatccgctgtgtgttt
gaggaggcagttgcgtccgctggctgggacttccattcagaccggttatgggatctctat
gctgaatgggagaaggagcagggaaacctgaaggctatgaccgctatttatgatagagta
ctaagggttcccacacagctctacaacgcacactatgagaaactgaaaactcacctaacc
tcccacccacctctggacttcctttcaccagaggagtatagtatggtgagagcagagtat
aaacaaacccaaatacatgctaaaaaagagagatctgatattgctgccaatgaagaagag
agaccgccgggtgaggaagagcctgcagatgacggcaaggactcggaagaggcagtgcaa
aagatgcaagagctcattttggcctctagagaggaagtataccaacaaaatgaggcagaa
gtcaaaaagagatggaattttgaggatgctattaaaaggccttatttccatgtaaagccc
atggacagaacccagctgaaggcttggcacagttatctggactgggagatggcagaggct
gagatgacatcaatggattttgaagggacgactgtggagggcagtgaagaatcaaaaaaa
gacgatgtggctagccatgggagagtgctggttctgtttgagcgctgtctcattgcttgc
gcactctatgaagaattctgggttaaatatatacattacctggaaccacgtggtgtggaa
gatgtgcgtaatgtgtatcgcagagcttgtggaatccacctgccatacaaacatagcatc
caccttcaatggtctgcatttgaggaaaagcatggtaatgcttcagaggcacagcgtata
ttggagtctttagagatggtattgcctggtttgtctgcggtgcgtttgaggagagtaggt
ctagagaggagagcaggtcatctggatgtagcggagtcactgnctaaagagtctgttcaa
cagagtaaagataatccttcactccacgccttttactcaatcaaactggcccggttcatc
ctcaagctgtataggaacccatccagggcccgcacagttctacaggaggcaatagagatc
agtccggataatggtcggctttatcaaaaccttatggagctggagatatctggtgatgtg
cgggcgaatgaaggtgcggttctgcagtgtgtggccaaagctcttgctgctccgctctcc
ccaaagaccaagattcatttctcccaacgtggtctgcagtttgctgaggattttggatcc
actgtacagagtctgttgagtaaatacgaggaccaccagaagctgctgaaggaacatgat
ggaaagagaggagcagagaacggggatagtgatgacccagagaaaatgagcaaaatggat
gatggatctgccacgggggtacagactgctcctcccactatggctcacatgccaatgaca
acaccacctccacctatgatgggcggagacatgagtgggtcatatggaggttatggcagc
tggtaccagcagcagtatgggggatatggtagctaccaaaatccttggaaccagtataac
cagtactatcctccaagctaa
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