Triplophysa dalaica: 130437842
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Entry
130437842 CDS
T09616
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130437842 (rnf130)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130437842 (rnf130)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130437842 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PspB
Motif
Other DBs
NCBI-GeneID:
130437842
NCBI-ProteinID:
XP_056625451
LinkDB
All DBs
Position
16:9492993..9532806
Genome browser
AA seq
428 aa
AA seq
DB search
MLKRLAAPASCSSCLLAFFLAFVSPRCTLSIGADKNMVNKEDYYSATVNATVLDHKGNPQ
QMVTKNDGRYGQNSPKTEAKGIVIAPAAVNGAVDLQGCCPYTRFVVPPKTTHWVAIMQRG
KCTFKEKILKAAAFNASAVIIYNNGSKEDTVTMAHEGTGDIVAVMITESFGKEILVFLEK
NQTVLVSVMVGSRGPVKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQ
RRLGDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCV
DPWLNEHCTCPMCKLNILKALGVMPNLPCVDNMGFDMERMSRSQTSSQRTALMDLSSETS
ISLEPLRHSSSSQHPSDDELIPRTGEINIAVTKEWFIVASFAVLSALTLCYMIIRATTST
PTDEMMFE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagactggccgcaccggcgtcatgcagcagctgtctccttgccttcttcctc
gccttcgtatctcccaggtgtacgctgtctatcggtgccgacaaaaatatggtcaacaag
gaggattattatagcgccacggtgaacgccaccgttttggaccataaaggcaatcctcaa
cagatggtaacaaagaatgatgggcgttacgggcagaattcacccaaaacagaggcgaag
gggattgtgatagcacctgctgctgttaatggggctgtcgatctgcaaggatgctgtcca
tacacacggtttgtagtgcctccgaaaaccacacactgggtggccataatgcaaagagga
aagtgcaccttcaaggagaagatcctgaaggcggccgcattcaacgcctcagcagtcatt
atctacaataatggctccaaagaggacacggtcaccatggctcatgaaggcaccggggac
attgtggcggtgatgatcactgagtcttttggaaaggagattctggtcttcctggagaag
aaccagacagtgctggtgtcagtgatggtggggtcacgagggcctgtcaagaacatcaat
cgcggatccttggtgtttgtctccatctccttcatcgtactgatgattatctcctccgct
tggctcatcttttacttcatccagaagatcagagacaccagtgctcgagaccgcagtcag
cgaaggctgggagatgctgccaaaaaggccattagcaagctgactaccaggacagtaaaa
agaggggacaaggaaacggaacccgattttaatcattgtgcagtatgtattgaaggttac
cagctaaatgatgtggtccgcatcttgccttgcaagcacgtcttccataaaatgtgtgtg
gatccatggctaaatgagcactgcacctgccctatgtgtaaactcaacatacttaaagca
ctgggagttatgccgaacctgccttgtgtggacaatatgggttttgacatggagcggatg
tcccgcagccagacgtccagccagagaacggcactgatggacctgtcttctgagaccagc
atcagtctggagcctctgcggcactccagttcatcccagcacccctccgacgatgagctc
atccctcgaaccggagagattaacatcgctgttaccaaagagtggtttattgttgccagc
ttcgccgtcctctctgctctcacactttgttacatgatcatccgagctaccaccagcacc
cccactgatgaaatgatgtttgaatga
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