Triplophysa dalaica: 130437927
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Entry
130437927 CDS
T09616
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw04120
Ubiquitin mediated proteolysis
tdw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130437927 (syvn1)
04120 Ubiquitin mediated proteolysis
130437927 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130437927 (syvn1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130437927 (syvn1)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130437927 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130437927
NCBI-ProteinID:
XP_056625575
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All DBs
Position
16:14182215..14187529
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AA seq
612 aa
AA seq
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MVRAALVTTTSLALTGAVIAHAYFLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLVGLLGVLDFMFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVILYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPPPAPAQAPAPAAPAAVP
PPVNVAQGMLPQFPPGMFPFWGPFPGAPPPAPPAAQAATDPPQHGTNGVQTQGAGASSST
QPSADSASPAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPASLSTMSEAELRE
LEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNTGETSAAANEES
SPSTDNSEIPSQENETQSTGPVNGATGFSQPDSTTEADKENEGECDDDGEPGAAELRRRR
LRKLETAQTPDH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagctctcgtgacgaccaccagtctggctttgactggggcagtaattgcc
catgcctactttctcaagaaccagttctacccgactgtggtataccttaccaaaagcagc
cctagtatggcagttttatacattcaggctttcgtgttggtattcctactgggaaaattt
atgcggaaggtctttttcggccagctgagagccgctgaaatggagcacctgatcgagcgc
tcctggtatgctgtaacagagacatgtttagccttcacggtgttcagggatgatttctct
cctcgctttgtggccctgttcactttgctgctgttcctcaagtgcttccactggctggct
gaagacagggtggactttatggaaaggagtccaaacatctcctgggtcttccacttcaga
gttctctctttggtggggttgctgggagttttagactttatgtttgtcaatcatgcgtgc
catagcatcatcaccagaggagcatcagtgcagctggtgttcggatttgagtatgcaata
ctgatgactatggttctcaccaccttcatcaaatacactctacatacagttgacctccaa
agtgaaaacccatgggacaataaggctgtctacatgttgtacacagaactctttaccggt
tttataaaggtgattttgtatatggcattcatgaccataatgataaaagtgcacacattt
cctctgtttgccatccggcccatgtatctcgcgatgaggcaattcaagaaggctgtaaca
gacgccatcatgtctcgacgagccatccgtaatatgaacactctctatcccgatgccacc
cctgaagacttgcaggccaccgacaatgtgtgcatcatctgccgtgaagagatggtgact
ggagctaagaaacttccctgcaaccacatctttcactcaagttgccttcgctcgtggttc
cagagacagcagacctgtccaacctgtcgtatggatgttcttcgagcatcccagccaaac
cagactcctcctccagctcctgcgcaggcacccgcccctgctgctcctgccgctgtccct
ccaccagtcaacgttgcccaaggtatgttgcctcagtttcctccgggaatgttcccattt
tggggtcctttccctggggcacctccacctgctccccctgctgctcaggcagccactgac
cctccacagcacggcacaaatggagtgcaaacgcaaggagcaggagccagcagctctaca
cagccttctgcagatagcgcttcaccagctccaggagccatgcctggattcccattttca
atgccaccccctttcccatcagccccatggttgccgatgcctcctcccccacccttcatg
tcatccatgccacctccaccagcatctctgtccaccatgtcagaagctgagctcagagaa
ctggagcaggagggcaggagaggtttagaagccagactgcagtgccttcacaacatccac
acattgctggatgctgctatgctcaacattcaccactacctcagcacggtggctacatta
agtcctcctagatcagaaactaacacaggtgagacaagtgcagcagcgaatgaggagtcc
tctccctccaccgacaactcggaaatccccagtcaggaaaatgagactcaaagtactgga
cctgtaaatggagctactggtttttcccaaccagattccaccacagaagcggacaaggaa
aatgagggagagtgtgatgatgacggtgagccaggtgccgccgagttgagaaggcgtcgt
cttcgcaagctggagactgctcagacccctgaccactga
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