Triplophysa dalaica: 130438023
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Entry
130438023 CDS
T09616
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130438023 (fmr1)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130438023 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
130438023 (fmr1)
mRNA cycle factors
Stress granule specific factors
130438023 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH_2
FXR_C3
Motif
Other DBs
NCBI-GeneID:
130438023
NCBI-ProteinID:
XP_056625744
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All DBs
Position
16:19182811..19194499
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AA seq
566 aa
AA seq
DB search
MDELAVEVRGASGAFYKANIKDVHESTVTVAFENNWQPERQIPFQDVRFPPPTGFQKEIN
ESDEVEVYSRANDKEPCGWWPAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
SSKNTFLKTRLDVPDDLRQMCAKDSAHKDFKKAIGAFHVTYEPEEKQLVILSVNEVTAKR
IAMLSDMHFRSLRTKLTLILRNEEATRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKLPGVTTIDLDEETCTFHIYGEDQEAVRKARSYLEFAEDVIKVPKNLVGKVIGKS
GKLIQEVVDKSGVVRVRVEPENDKKPISPLEEGMVPFVFVGTKESISNARILLDYHLNYL
KEVDQLRMERLQIDEQLRQIGGGPRAPPGRPEKEKPFMADNGMGPSRGGSSKPFGRGGRG
RRGPTLASGTNSEASNASETESDHRDELSDWSLAPTDEESVAYPKRAPDGRKRGGGPRGR
GGRGRGGYKPEDMHWNESRSRSSRDSRDTLQIRIDSNNERSVHTSRGAQSVAGDSGGNRQ
RPIKDRGMQKEKQEGPDSQAVVNGVS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctcgcggtggaagtgcggggagcgagcggcgctttctacaaggctaatatt
aaagatgttcatgaaagtacagtcacagtggcttttgagaacaattggcagccagaacga
cagattcctttccaagatgttcggtttccacctccaaccggctttcagaaagagataaat
gagagcgatgaagttgaggtgtactccagagccaatgataaggagccctgtggatggtgg
ccagccaaagttaggatggttaaaggagagttttacgtcatagaatatgcagcctgtgat
gccaccctgaatgaaatagtcactttagaaagactacggccagtgaaccccaacaaacca
tcttcgaagaacactttcctcaaaaccagactggatgttcccgacgacctgagacaaatg
tgtgcgaaagactccgctcacaaagactttaaaaaggccatcggagcgtttcacgtcacg
tacgaacctgaagaaaagcagctggtcattttgtcggttaatgaggtcacagcgaagcga
atagcgatgttgagcgacatgcacttcaggagtttgcgcacaaagctgacgttgatactg
aggaacgaggaagcgaccagacagctggagagctctcgacagctggcttcaaggtttcat
gagcagtttgtggttcgtgatgatctaatgggtttggccataggcacccacggggcgaac
attcagcaagccaggaagcttccaggggtcaccaccattgatctagatgaagaaacatgc
acgtttcacatctacggagaggaccaggaggctgtgcggaaggccagaagctatcttgag
tttgccgaagatgttatcaaagttcccaaaaatttagtcggcaaagtcattggcaagagt
gggaagcttattcaagaggttgtggataaatctggagttgttcgagttcgagtggaacca
gaaaatgacaaaaagccaatttctccattagaggagggaatggtgccatttgtgtttgtg
ggtacgaaagaaagcatttcaaatgcccgtattctgctggactaccatctcaactatcta
aaagaggttgatcagctcagaatggagagactgcagatcgatgagcagctccgacagatc
ggtggagggcccagggctcctccaggcagacctgagaaagaaaaacccttcatggctgat
aatggcatgggaccctcgcgaggtggcagcagcaagcccttcggtcgtggagggagaggc
aggcggggcccaacactggcctcaggcaccaactctgaagcctctaatgcatcagaaaca
gagtctgaccacagagatgagcttagcgactggtcacttgcccccacagatgaggagtca
gtggcttaccccaaaagagccccagatggacgcaaaaggggtggtgggcccagaggccgt
ggggggagaggaagaggtggatacaaaccggaggatatgcactggaatgagtcacgatct
cgcagttccagagactccagagacacattgcagattcgcatcgacagcaataacgagaga
agcgtccacactagccgaggggctcaaagtgtagcaggagacagcggaggaaaccgacag
agacccatcaaggatcgaggaatgcagaaagaaaagcaagaaggcccagacagccaagct
gtcgtgaacggagtttcgtag
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