Triplophysa dalaica: 130438097
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Entry
130438097 CDS
T09616
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130438097 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130438097 (cstf2)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
130438097 (cstf2)
U7-dependent histone pre-mRNA processing factors
130438097 (cstf2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
130438097
NCBI-ProteinID:
XP_056625850
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All DBs
Position
16:7660377..7669075
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AA seq
508 aa
AA seq
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MASLAAAAAAAAAARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRE
TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIE
SPYGDGCIPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYAL
LQAQVVMRIVDPEIALKMLHRPAVVQPVNPNSQPGAVPVTNQPLPQPTAPVSQPQQMPGM
HVNGAPQMMQPPQMGGGGPGPMPGQGPMGPAGGMQAQIGIQPGGPLPMDRGPGNLQDSPI
GAAGQAAIERSPVPIVDPRAPMRGAPPGPQGIPPRGLLGDGPNDPRGGSLVNVTGDVVEP
GRGYIGGPPQHQGPPMHMAPPDMRGPHDMRGGPIMGEQRGPMMEPRGPPMEARGRDPRAV
DARGPISGQRVPGAAGMQGPPPHGMGQSAPPAARPGPTSDVSSQDHEKAALIMQVLQLTP
EQIAMLPPEQRQSILILKEQIQKTAGAP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtttagcagccgccgccgctgccgctgcagctgcacgggatccagcagtggat
cgatctttgcgttcagtcttcgtgggaaacatcccatatgaggcaacggaggagcagttg
aaggacatcttctcggaggtcggacttgtcgtcagttttaggttggtgtatgacagagaa
acaggtaagccgaagggttatggcttctgtgagtaccaggatcaagagactgcgctcagt
gccatgcgtaacctaaacggcagagaattcagtggaagggctctccgtgttgacaacgct
gccagtgagaagaataaagaggagctgaaaagtttgggaactggtgctccaattattgag
tccccttatggagatggctgcataccagaagaagccccggagtcaatcagtagagcggtg
gccagcctgccccctgaacagatgtttgagctaatgaaacagatgaagctttgtgtgcag
aacagtccacaggaagctaggaacatgctgttgcagaatcctcagctagcttatgccctg
ctgcaggcacaggtcgtcatgaggattgtggaccctgaaattgctctgaaaatgcttcac
cgtccggctgtggttcagcccgtaaacccaaattctcagcctggggcagtgcctgttact
aaccagcccctgcctcagcccactgcccccgtctctcaaccccaacagatgccaggcatg
catgtgaacggagctcctcaaatgatgcagcctccacagatgggaggtggaggacccgga
ccaatgccaggacagggaccaatgggaccagctggcgggatgcaggctcagataggaatc
caaccaggaggtcctctgcccatggataggggaccaggaaaccttcaggactctcctata
ggagcagctgggcaggctgctatcgagcggtctccagtgccaattgtagacccacgtgca
cctatgcgaggggccccgcccggccctcaagggatcccacccagaggtcttctcggcgat
ggcccgaacgacccacgtggcggatcattggtcaatgtcactggagatgttgtggaacca
gggcgtggttatattggaggccctccgcaacaccaggggccacctatgcatatggcaccc
ccagacatgcgcggccctcatgacatgaggggaggaccaataatgggagagcaaagaggc
cctatgatggaaccgcgtggcccacccatggaggcaagaggtcgtgatccacgggctgtt
gatgctcgaggtccgatatcaggtcaaagggttcctggggcggctgggatgcaaggtcct
cccccccacggcatgggacagagtgcacctcccgcagcaagaccaggccctacttcggat
gtatcatcgcaagaccatgagaaggctgccttgattatgcaggtcctgcagctgactcca
gaacagattgccatgctgccaccagaacaaagacagagcattctcatactaaaggagcag
attcaaaagacagcaggcgcaccttga
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