Triplophysa dalaica: 130438193
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Entry
130438193 CDS
T09616
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130438193 (pcdh19)
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Protocadherins
130438193 (pcdh19)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
130438193
NCBI-ProteinID:
XP_056625996
EnsemblRapid:
ENSTDLG00000013215
LinkDB
All DBs
Position
16:8002777..8054745
Genome browser
AA seq
1110 aa
AA seq
DB search
MIAQIRAWTQTSTGIMRSKDMDFLQMFLCFLMCWTGVDAVFNLKYTVEEEMRPGTKIANV
TADAKVAGFVLGNRQPYLRVISNSEPRWVNLSPAGLLITKQKIDRDAVCRQTPKCFISLE
VMSNSMEICVIKIEIIDVNDNAPRFSTNHIDIEISENAAPGTRFPLEGASDPDSGSNGIQ
TYTITPNDIFGLEIKTRGDGSKIAELVVEKTLDRETQSRYTFELTAEDGGDPPKSGTVQL
NIKVIDSNDNNPVFDEPVYTVNVLENSPINTFVIDLNATDPDEGTNGEVVYSFINFVSNL
TKQMFKIDTKTGVITVNGILDHEELHVHEIDVQAKDLGPNSIPAHCKVIVNVIDVNDNAP
EIKLLSENSEMVEVSENAPLGYVIALVRVSDNDSGANGKVQCRLQGNVPFRLNEFESFST
LLVDGRLDREQRDMYNLTILAEDSGYPPLRSSKSFAVKVTDENDNPPYFTKPHYQAMVLE
NNVPGAFLLAVSARDPDLGMNGTVSYEIIKSEVRGMSVESYVTVNSNGEIYGVRAFNHED
TRTFEFKVSAKDGGDPPLTSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPKNAGVGY
LVTQIKADDYDEGENGRLTYSISEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVAH
DHGQTSLSASAYIVIYLSPDMNTQEQIGPVNLSLIFIIALGSIAVILFVTMIFVAVKCKR
DNKEIRTYNCSFLYLRRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSS
LTSSLNYFDYHQQTLPLGCRRADSTFLNVENQNSRNAAPNHGYHHTFTGQGPQQPDLIIN
GMPLPETENYSIDSSYVNSRAHLIKSTSTFKDMEGNSLKDSGHEESDQTDSEHDVQRGHY
ADTAVNDVLNMTVPPNNSQLPDQDQSEGFHCQDECRILGHSDRCWMPRVPMSARAKSPEH
GRNNVIALSIEATTVDVPHYEDCGTTKRTFATFGKDGPDEERSEQRGRRQMAEPAVCSPK
TNGAVREAGNGREAVSPITSPVHLKSPQSKPPSTYNTLKCRDAERIANHSLLRQPEGKDS
EPPMREINTLLQDSREKESPGSKRLKDIVL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgatagcgcaaataagagcgtggacacagacatcaacaggtataatgcgttcaaaggac
atggatttcctacaaatgttcttgtgctttcttatgtgctggactggagtcgatgcagtt
tttaatttgaaatatacggtggaagaagagatgcgtccggggacaaagatcgccaacgtg
acggcagacgcaaaagttgcgggttttgtactgggaaaccgacagccttatttgcgggtc
atatccaattccgagccgcgatgggttaatctgagccccgccggactgctcatcacaaaa
caaaaaattgatcgggacgctgtttgcagacagacaccgaagtgtttcatctctttggag
gtgatgtcgaactcgatggagatctgcgtgatcaaaattgagattatcgacgtgaatgac
aacgcgccgcgcttttctaccaaccacattgacatagaaatctcagaaaacgctgcgccg
ggtaccagatttcccctagagggggcaagcgatccggattcggggagcaacggcattcaa
acctatacaattacccccaatgatatttttggtcttgagattaaaacgaggggagacggg
tccaagatcgcagagcttgtggtagaaaagactttagacagagaaacgcagtcccgttac
acgtttgaactcaccgccgaggatggcggtgaccccccaaagtctgggactgtgcaactc
aacatcaaagtcatcgactcgaatgataacaatccagtgttcgacgagccggtgtacact
gtaaacgtgctggagaattcccccattaacacttttgtcatagacctgaacgccacggat
ccggatgaaggaaccaatggcgaggtggtttactcgttcattaactttgtctccaatcta
accaaacagatgttcaaaatagacaccaaaacgggtgtgataacagtaaatggcattttg
gaccacgaagaattgcacgtccacgaaatagatgtacaagccaaagatctgggtccaaac
tcaatcccagcccactgcaaagtgattgtcaatgtaatagacgtgaacgacaacgcacca
gaaatcaaacttctgtcagaaaacagtgagatggtggaggtgagcgagaacgcgcctctc
ggatatgtaatagcactggtgagagtctcagacaatgactcgggtgcgaatggaaaagtg
cagtgcagactgcagggtaatgtgcctttcaggctcaacgaattcgagagcttctccacc
ttacttgttgatggtcgtctggatagagagcagagagacatgtacaatctgaccatttta
gcagaggacagcggatatcccccgctcagaagctcaaaatccttcgctgttaaagtaaca
gatgaaaacgacaacccaccatacttcaccaaaccccattaccaagcaatggttctcgaa
aacaatgtcccaggtgcgtttctcctggcggtgtccgcaagagaccctgacctgggcatg
aacggcacagtctcgtacgaaatcatcaaatcggaggtgcgggggatgtctgtggaatct
tacgttacagtcaactccaacggtgaaatatacggggtcagggcttttaatcacgaagat
acgcggacgtttgagttcaaagtctcagcaaaggacgggggtgacccaccgctgaccagt
aacgccaccgtgcgcatcgtcgtactggatgtaaacgacaacacacctgtgatgacgacc
ccgccgctggtgaacggcaccgcggaggtatcaattcccaaaaacgctggagttggttat
ttggttacacaaataaaagccgatgactacgacgagggggaaaacggaagattaacgtat
tcaatttcagaaggagacatggcatactttgaaattgaccagataaacggcgaggtgcga
accacaaagacgtttggggaaaacgcgaaaccatcctaccaaataacggtggtggcgcac
gaccacggccaaacttccttatccgcctctgcctacattgtcatttatctctcccccgac
atgaacacacaggagcaaatcggacccgttaacctctctctcattttcatcattgcactg
ggttcaattgcggtcattttgtttgtcacaatgatctttgtggcagtcaagtgcaaaagg
gacaacaaggaaatccgaacgtacaactgcagtttcttgtacctgcgcagggtggcggag
tactcctacggcaaccagaagaagtccagcaagaagaagaagctgagcaagaacgacatc
cggctggtgccgcgggacgtggaggagacggacaagatgaatgtggtgagttgctcgtct
ctcacctcttcgctcaactacttcgactaccaccagcagactcttccactgggctgcagg
cgcgccgatagcaccttcctcaacgtggagaaccagaactccaggaatgctgcacccaac
catggctaccaccataccttcacagggcagggccctcagcagcctgacctcatcatcaac
ggcatgccgctgcctgagacggagaattattccattgactccagttatgtaaacagcaga
gcacacctcattaaaagcacgtcaacattcaaggacatggagggaaacagtctgaaggac
agcgggcacgaagagagcgaccaaaccgatagcgaacacgacgttcagagaggccactat
gccgacacggccgtcaatgacgtgctaaatatgaccgtacctccaaacaactcacagtta
cccgaccaagatcaatccgaaggattccactgccaagacgagtgtcgaatcctgggccac
tcggaccgctgctggatgcctagggtgccgatgtcggcgagagcgaaatctcccgaacac
ggtcgcaacaacgtcatcgccctgtctatcgaggccaccactgtggacgtacctcactac
gaggactgcggtaccaccaaaaggacttttgccaccttcggcaaagacgggccggacgag
gaacggagcgaacagaggggcaggcggcaaatggcagagccggctgtctgcagccccaag
accaacggagctgtgcgcgaggctggaaacggtcgggaggccgtcagccccatcacctcc
cccgtgcacctgaagagcccccagtctaaaccgccctccacctacaacacgcttaagtgc
cgggacgcagagcgcatagccaaccacagcctgctacggcagccagaggggaaggacagt
gagccgcccatgcgggagatcaacacgctcctgcaggacagccgtgagaaagagtcccct
ggaagtaagcgcctgaaggacattgtgctttaa
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