Triplophysa dalaica: 130438218
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Entry
130438218 CDS
T09616
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130438218 (rlim)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130438218 (rlim)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130438218 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
SPT6_acidic
zf-RING_16
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
130438218
NCBI-ProteinID:
XP_056626030
LinkDB
All DBs
Position
16:complement(21364575..21371092)
Genome browser
AA seq
760 aa
AA seq
DB search
MEGQDNAEQGSSDQSETQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQIKHGPEPPGNENTEERREEPTVTESEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNLAEQQTQTERSEGSQERPDGPVSEQ
EILMETAEVVEEPVMEELALIVEPDLSLNREVSPQSAPSPTSTTSATSPARAPSTTSPAR
APSATSPARAPSATSPARAPSATSPARAPSPTPSPASAPCPASAPCPASAPCPASAPCPA
SAPCPASAPCPASAPCPASAPCPASAPCPASAPGPASAPGPASAPGPASTPNPPSPQSLP
SLASVEQPRRGQVRARSRSPEQRRTRARTARGRSPLNLERLDGLSPAQHGLPPRTSESLP
EPQVEGSSRTRQLFLSRQSTAEAEAQESGAAPEAPQERETPAGEAGASGRRPPTIMLDLQ
VRRVRPGEYRQRDSIANRTRSRSQTSNNTLLYETERGGFRRTFSRSERAGVRTYVSTIRI
PIRRISDAGLGEATSLALQSMIRQIMTGFGELSYFMDSDYPESNREESDSPPADIADALS
NPDVSTGTADSFVSGAGGSNQSDLEARTEEREVEGGVPSAASPRESRARPRAPISLDETG
SLPFLRLAHFFLLNEDDDDQPRGLTKEQIDNLSVRNFGESDALKTCSVCITEYAEGNKLR
KLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagaacaaggtagcagtgatcagtcagaaacgcagcgcagg
agacagttggaccgtcttgaccgagaagaagccttctaccagtttgtcaacaatctcagc
gaggaagactacaggctcatgagagacaacaatctgcttggcacccccggtgaaataact
gcagatgaactgttgagtcgtcttcgtcaaatcaagcatggccccgagccacccggcaat
gaaaacactgaggaaagaagggaagagcctactgtgacagagtctgagggcacagaggaa
aaccccagtggggagacccttcttgactggctcaacacagttcgacagacgggtaataca
accagaagcggttaccggggtaaccagtcatggagggctgtgagccagaccaatcccaac
agtggagatttccgcttcagtttggaaatcaatgtcaatcgaaacctagccgagcagcaa
acgcagacagagagatcggaaggcagccaggaaagaccagatggacccgtgtctgagcaa
gagattcttatggagacagcagaggtggttgaagagccagtgatggaagagttagctctg
atagtcgagccagacttgtctctaaacagagaagttagtccacaaagcgcaccaagcccg
acaagcacaacaagcgcaacaagcccggcaagggcaccaagcacaacaagcccggcaagg
gcaccaagcgcaacaagcccggcaagggcaccaagcgcaacaagcccggcaagggcacca
agcgcaacaagcccggcaagggcaccaagcccaacaccaagcccggccagcgcaccatgc
ccggccagcgcaccatgcccggccagcgcaccatgcccggccagcgcaccatgcccggcc
agcgcaccatgcccggccagcgcaccatgcccggccagcgcaccatgcccggccagcgca
ccatgcccggccagcgcaccatgcccggccagcgcaccaggcccggccagcgcaccaggc
ccggccagcgcaccaggcccggccagcacaccaaatccaccaagcccacaaagtctacca
tccttggcatcagtggagcaaccacgtagaggtcaagtaagggctcgcagcagaagccca
gagcaacgaaggacaagggcacgtactgccagaggtcggtcgcctctcaaccttgaaaga
ttagatggactttctcccgctcagcacggcctacctccacgcacttctgagagccttccc
gagccccaggtggagggtagctcaaggactcggcagctgtttttgtctaggcagagcacg
gcggaagcggaagctcaagaatcgggagctgcccccgaggcaccccaggagagagagacg
cctgcgggagaagcgggagcttcggggcgacgtccaccaactataatgctagatttgcaa
gtacgtagagtacgtccaggagagtatcgccagcgggacagcattgctaaccgcacaagg
tctcgttcgcagacctccaacaacactttattatacgagacagagcgcggcggtttccgc
aggactttttcgcgttctgaacgagccggagtgagaacatatgtcagtaccatccgcatt
cccattcggaggatttctgacgctggactaggggaagccacttccttggctctgcagtcc
atgattcggcagatcatgactggcttcggtgagctcagctactttatggactcggactat
cctgaatccaaccgtgaggagtcagacagtccaccggcagacatcgcagacgcgctgagt
aaccctgatgtgtctacaggaactgcggattctttcgtttctggggccggaggctccaac
cagagtgatttagaggcacggacagaagagagggaggtggaagggggagttcccagcgct
gcgtctcctcgcgagagccgggccagacctcgggctcctattagcctggatgagaccggc
tctctgccttttctgcgactcgcgcacttcttcttactcaacgaggatgacgacgatcag
ccacgaggccttaccaaagagcagatcgacaacctgtccgtgcgaaactttggggagagt
gatgcgcttaaaacctgcagcgtctgcatcacagaatacgccgaaggcaacaagttgcga
aagttgccctgttctcacgagtatcacgtgcactgtattgaccgctggctttccgagaac
tccacctgcccgatctgtcgccgggcggttcttgtttccgccaaccgtgagagtgtcgtc
tag
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integrated database retrieval system
