Triplophysa dalaica: 130438245
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Entry
130438245 CDS
T09616
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
tdw03015
mRNA surveillance pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130438245
09122 Translation
03013 Nucleocytoplasmic transport
130438245
03015 mRNA surveillance pathway
130438245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130438245
03041 Spliceosome [BR:
tdw03041
]
130438245
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
130438245
Spliceosome [BR:
tdw03041
]
Common components
Common spliceosomal components
Cap binding complex
130438245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
GBP_C
FapA
AAA_11
MG280
Vfa1
DUF1690
TFIID-18kDa
EMC3_TMCO1
tRNA_bind_2
Uso1_p115_C
DUF4407
PHM7_cyt
DUF1664
LUC7
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
130438245
NCBI-ProteinID:
XP_056626063
LinkDB
All DBs
Position
16:complement(3899328..3907617)
Genome browser
AA seq
798 aa
AA seq
DB search
MSRRRHSDDNNDEGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLE
ADLPNYKNKILRILCSVARLLPEKLSVYTTLVGLLNARNYNFGGEFVEAMVRQLKETLKS
NLYTEAVYLVRFLCDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVYAVLSNLP
WVGKELYEKKDVEMDRLLNQIEGYLKRRQKIHVPMLQVWTAEKPHPQEEYLDCLWAQVQK
LKKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPMPRVVFRMFDYTDAP
EGPVMPGSHSVERFVIEENLHCIINSHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGE
LFQLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTVCIDRLINWFS
HHLSNFQFRWSWDDWADCLTQDLEKPKPKFVKEVLEKCMRMSYHQRIVDIVPSGFTALIP
AEPLCHYKYGDETSGSLPGFAESTTVGNAIKNRASNEEILTILKDVPNPNQDDDIDEGES
FNPLKIEVFLQTLLHLAAKSFSHSFSALAKFHEVLKNLTESDEGKLHILRVLYDFWKNHP
QMTAVLVDKLIRTQIVDCATVANWIFSTDMAQDFTRFYVWEILHSTIRKMNKHVQKIQKE
LDEAKEKLEKQQNKKQRDSGDEEDMEKNSEDEEGQLEEQIEKLQEKVESAQSEQKNLFLV
IFQRFIMLLTEHLVRCETSGIDINTTWYKNCIERLQQIFLMHHVIIQQYVGTLENLLFTA
ELDHHILAVYQQFCALQL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtctaggcgaaggcacagcgacgataataatgatgagggttcccagcctcacaaacgg
aggagaacatcagaaccgattgagattgaggaccgtctggagtctttgatttgccgtgtg
ggcgaaaagagtacatcctccctagagagtaatctggaaggtcttgctggtgtcctggaa
gctgatctcccaaattataaaaacaaaatcttgcgaatcttatgttctgttgcaaggctt
ttgcctgagaagttgtcggtgtacaccacgctggtgggtcttcttaatgctcgcaactac
aactttggaggagagtttgtggaggccatggttcgacagcttaaagagacactgaagtca
aacctgtacactgaggctgtttacctggtgcgtttcctatgcgacctggtaaactgtcac
gtcattgcggctccctcgatggttgctatgtttgagaactttgtcagtgttacacaggaa
gaggacattccgcaggtgcggtctgactggtatgtatacgctgtgctgtccaaccttcct
tgggttggcaaggagctgtacgagaaaaaggatgtagaaatggatcgcttactcaaccaa
atcgagggctacctgaagcggcgacaaaagattcatgttcccatgctgcaggtgtggact
gcagaaaagccccaccctcaggaagagtatctagactgtctctgggctcaggtgcagaag
ctaaagaaggaccgctggcaggagcgtcacatcctgcggccatatatcgcatttgatagc
gtgctttgtgaagccctgcagcacaacctgcctcccttcacccctccagcccactcggat
gatgctgtctaccccatgccccgcgtcgtctttcgcatgttcgattacacggatgcccca
gaggggccggttatgccaggcagtcattcagtcgagcgctttgtcattgaggagaatctg
cactgtataatcaactctcactggagagagcggaagacctgtgctgcccagttgctcagt
taccctggcaaaaacaagatacctcttaactaccacattgtggaggtgatatttggggag
ttattccagctgccttctccgcctcacattgatgtcatgtacacagcattactcatcgag
ctctgtaaattgcagccgggctctttaccacaagtcctcgctcaagccacagaaatgatg
tatatgagactagacacaatgaacactgtttgtatagaccgactcatcaactggttctcc
catcatttaagtaacttccagttcagatggagctgggatgactgggcggactgcttgact
caggaccttgaaaagcccaaacccaagtttgttaaagaggttttggagaagtgtatgagg
atgtcttaccatcaacggatagtggacattgttccttctggtttcaccgctctgatcccc
gctgagccattgtgtcattataaatatggagatgagaccagcggttcattgccaggattt
gcagagtcaacaacagtgggtaacgctatcaaaaaccgagcgtcaaatgaggagattcta
accatattaaaagatgtgcccaatcccaaccaggatgatgatattgatgagggcgagagt
ttcaaccctctgaagattgaggttttcctgcagacattgcttcatttggctgccaagtcc
ttcagtcattccttcagtgctctggccaagttccatgaggtcctgaagaaccttacggag
agcgatgaggggaaactgcacatcctcagggtcctgtatgacttctggaagaaccaccct
cagatgactgctgtgctggtggacaagttgattcggactcagatcgtggactgtgcaact
gtggccaattggatcttctctactgatatggctcaggatttcaccaggttttacgtgtgg
gagattcttcattcaaccatccggaagatgaacaagcatgtgcagaagatccagaaagag
ttagacgaggcaaaagagaaactggaaaagcaacaaaacaaaaagcagcgggacagtggc
gatgaagaggacatggagaagaacagtgaggatgaggaaggtcagttagaggagcagatc
gagaagctccaggagaaagtggagtcagcccagagcgaacagaagaacctcttccttgtt
atttttcagcgctttattatgttactgacggaacacctggttcgctgtgagaccagcggc
atcgacatcaacaccacctggtacaagaactgcatcgagaggctacagcagatcttcctc
atgcatcacgtgatcatccagcagtacgtgggcaccttggagaacctgcttttcacggct
gagcttgaccatcacatcctggctgtataccagcagttttgcgctttgcaactctga
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