Triplophysa dalaica: 130438287
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Entry
130438287 CDS
T09616
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130438287 (pcdh10b)
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Protocadherins
130438287 (pcdh10b)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
TMEM154
Motif
Other DBs
NCBI-GeneID:
130438287
NCBI-ProteinID:
XP_056626115
EnsemblRapid:
ENSTDLG00000008604
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All DBs
Position
16:7071592..7084129
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AA seq
1026 aa
AA seq
DB search
MFVFLLLLCLADGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQTASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAYDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAMHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLVIQLNATDSDEGPNGEVIYSFSNHISGRVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEENGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETLEAYTVTVVARDKGIP
SLASSKSIKVHVSDENDNAPTFTQPVYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFMVQARDSGSPELWSNTTVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPQQLYELLIEVRDHGQPPMSCSAVVQVTLVDSLVE
GHSGERGSAKAKEASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYSTCLASD
CCCLVGCGSCGSGGCCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFMKACSPSRSNDTDHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFMPTEARQGADYRSNLHVPGMDSVPDSEVFE
GETLAGDQSFSTFGKETPHHPNQMHQHQHHQHHLNASTLERKEFDALLCNSRMPYKAACL
SRKRIC
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtatttttgctcctgctgtgtctcgcggatggtgtagtttcgcagatacggtac
tctgtgcccgaggaagcggagcatggcacgtttgtgggaaatatcgcagaggatttggga
ctggaccttacgaaactttcatcccgccgatttcaggtggtgcccagctcgcggacgccg
tacctggaagtaaacttggaaaacggggtgcttttcgtgaacgagaaaatcgaccgggag
cgcatctgtaagcagactgccagctgtttgcttcacctggaggtgttcctggagaaccca
ctcgagctctttcgcgtggagatagaggtggtggacatcaacgacaacccgccgagcttt
ccagagacggacatcaccgtggaaatatccgagagcgcgacccctggcacgcgcttccct
ttggagagcgcctacgacccggatgtcggtagcaacgcactgcgcacctacgacatcacc
aacaacaactatttctacctagacgtgcaaacgcaaacggacggcaacaaattcgcagag
ctggttttggaaaagccgttggatcgagaacagcaggcaatgcaccgttatgttctcacg
gccgtggacggtggccaacctcctcggactgggacagcattgcttgtggtcagagtgctc
gactccaacgacaacgtccccgtgtttgatcagccggtatactctgtgaacctggcagaa
aacgcgcccgtgggcacgctcgtgattcaacttaacgccaccgattcagacgagggccct
aacggagaggtaatttactcgttcagcaaccacatctcgggtagagtaaaagaactgttt
gatattgatgctagaactggccgaatagaggtcagaggcgaggtggactttgaggaaagc
agcttgtatcagatttacgttcaagcgaaagatatgggaccaaacgccgtgcccgcgcat
tgtaaagttttggtaaaagtgacagacgtgaatgacaacgcacctgaaatcatcttcagc
acagtcacggagtccgtgagcgaaaacgcagccacgggtaccgtcatcgctctgctcagc
gtcacagataaggactcggaagaaaacggacagactcatgtggagattcttggcgacgtc
ccttttaaacttaaaacctcattcagaaattattatactattgtaaccgatggtcccctc
aacagagagactttagaggcgtacactgtcactgtagttgcaagagataaaggaattcca
tctttggcgagcagcaaatcaatcaaagtgcacgtgtcagacgagaacgacaacgcgccc
acttttacgcagcccgtttatgatgtgtatgtgactgaaaacaacgtccccggtgcttat
atctacgctgtcagtgccgttgaccccgacgtcggacagaatgcttatataacttactcc
atagtggagtgtgagatccagggtatgtcagtggtcacgtatgtgtccatcaactcggag
aatggttatctctacgctctcagatcatttgattatgagcaactaaaagactttagcttt
atggttcaagccagagactcgggcagccccgagttgtggtccaacaccacggtaaatgta
attattgtggatcaaaacgataacgcgccgtctgtgattgcgcctctcggaaaaaatggc
accgcgcgggagcctttaccgcgctctgctgaaccgggctatttggtgacgcgcatcgtc
gcaatggatgcagatgatggagagaacgcgcgattgtcctatagtatacagcgaggcaac
gagaatgggatgttccgaatggactggcgtaccggggagttgcgcacggctcgtcgggta
tcagctaaacgagacccacaacagctttatgagctgctgatagaagtaagagatcacggg
cagcctcccatgtcttgtagcgcagtcgtacaggttacactggtagatagtctcgtagag
ggtcacagtggagagcgcggctctgccaaggccaaagaagcgtctcttgatctgacactc
attctcataatcgcgcttggctcagtctcctttatctttctgctggccatgattgtcctg
gccgtgcgctgtcagaaggacaaaaagctaaacatttacagcacctgtctggcgagcgac
tgctgttgcctcgttgggtgcgggtcgtgcggatcgggcggctgctgcgggcgtcaggcc
cgagccgcccgaaaaaagaagaaactgagcaagtcggacatcatgctggtacagagcacc
aacacggccaacgtgagcgttgcgagcgccgcgcaggtacccgtggaggaatcgggaagc
ttcggctctctgcatcagagccagaattactgttaccaggtctgtctgactccagaatcg
gccaaaacggacttgatgttcatgaaggcctgcagcccgtcccgcagtaacgacaccgac
cacaacccgtgcggtgccatagtgaccggctatacggaccaacagcagccggacatcata
tcaaacggcagcctgctctccagtgaaacaaaacaccagagagcagagctaagttatttg
gtcgaccgaccaaggcgtgttaacagctctgcatttcaggaggcggatattgtgagctca
aaagacagcggccacggagacagcgagcagggagacagtgaccatgatgccatgcatcgc
ggacattcctctggagcagacctgttctccaactgcacagaagagtgcaaggccctcggc
cactcagatcgctgctggatgccaagtttcatgccaaccgaagcgcgacagggcgccgat
taccgaagcaacctgcatgtgccgggcatggactccgtgccagactctgaggtatttgag
ggcgagaccttggcgggcgatcagtcattctccacctttggcaaagagacgccacaccac
cccaaccagatgcaccaacatcaacaccatcaacaccacctcaatgcttccacgctagag
aggaaagagttcgatgcacttctgtgtaactcgcgcatgccttacaaagccgcctgtctg
tcgcggaaaaggatttgctag
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