Triplophysa dalaica: 130438310
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Entry
130438310 CDS
T09616
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
tdw
Triplophysa dalaica
Pathway
tdw04080
Neuroactive ligand-receptor interaction
tdw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130438310
04082 Neuroactive ligand signaling
130438310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130438310
Ion channels [BR:
tdw04040
]
Ligand-gated channels
GABA-A
130438310
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130438310
NCBI-ProteinID:
XP_056626152
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Position
16:complement(969678..1002309)
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AA seq
451 aa
AA seq
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MRERLFHLLLFSLTLFWHTRFVCADSTTDAFKNNITLFTRILDRLLDGYDNRLRPGLGDR
VTTVKTDIYVTSFGPVSDTDMEYTIDVFFRQSWKDERLRFEGPMNILRLNNLMASKIWTP
DTFFHNGKKSVAHNMTMPNKLLRIQDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCPLKF
GSYAYTTSEVTYTWTKNASNSVVVEEESSRLNQYDLLGQTVGNETIRSSTGEYTVMTAHF
HLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSL
PKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKKKEKASVIKKN
NAYAVAVANYAPNITKDTVLPTIAKGSTPDLGKGKTDAIKQAEAKKTFNSVSKIDRMSRI
MFPVLFGSFNLVYWATYLNREPVIKDMVPSN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaggctgtttcatcttctcttattctctctaacgctgttttggcacacaaga
ttcgtgtgcgcagattccacaacagacgcctttaaaaacaacatcacgctgttcacacgg
atcctggaccgtctgctggacggctacgataatcgcctgagacccggactgggagatcga
gtgaccacagtaaagacggacatctatgtcaccagcttcggccctgtttcagacacagat
atggagtacaccatcgatgtgttcttcaggcagagctggaaggatgagaggctgaggttt
gagggaccgatgaacattctccgtctgaacaacctgatggccagtaagatctggactcca
gacacattcttccacaacggcaagaaatccgtcgcacacaacatgacaatgcccaacaaa
ctgctgcggatccaagacgacggcactcttctttacaccatgaggttgaccgttcatgcc
gagtgtccgatgcatcttgaagattttcccatggatttccactcgtgtccgctgaagttt
ggcagctacgcttacaccacttcagaagtcacgtatacgtggacgaagaacgcatctaat
tcggtggtggtggaggaggagagttccagactcaaccagtatgatctactgggacaaact
gtgggaaatgaaaccatcagatccagcactggtgaatacacagtcatgacggcacacttt
cacctgaagagaaagatcggttattttgtgattcagacgtatctgccgtgcattatgacc
gtcatactgtcgcaggtgtccttctggctaaaccgggagtctgtgccggcccggaccgtg
ttcggtgtgactactgtactgacgatgaccacactgagtatcagcgctcgtaactcactg
cctaaagtcgcctacgccaccgccatggactggttcatcgccgtgtgttacgctttcgtc
ttctccgccctcatcgagtttgccaccgtcaactacttcaccaaacgcggctgggcgtgg
gacggcaagagtgtggtcagcgaaaagaaaaaagaaaaagcttcagtcatcaagaagaac
aacgcatacgccgtcgccgtggcgaactacgcccccaacatcaccaaggacactgtgctc
cccactattgccaagggcagcacaccggatctaggcaaaggcaaaacagatgccatcaaa
caagccgaggccaagaaaaccttcaacagcgtgagtaaaattgaccgaatgtctcgcatc
atgtttcccgttctcttcggatcatttaatctggtttactgggcgacatacttaaacaga
gaacctgtgatcaaagacatggtgccgtccaactag
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