Triplophysa dalaica: 130438324
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Entry
130438324 CDS
T09616
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130438324 (ssrp1a)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130438324 (ssrp1a)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130438324 (ssrp1a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130438324 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
130438324
NCBI-ProteinID:
XP_056626171
LinkDB
All DBs
Position
16:complement(14666307..14677851)
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AA seq
710 aa
AA seq
DB search
MGDTLEFNEIYQEAKGSWNDGRLRFGKQSVVYKSNKTGKVDSIQANELSVGQWRRVCLGH
GIKLTTSSGHVYKYDGFKDTDFEKLSAFFKTNYKLELTEKDMCVKGWNWGTAKFAGPLLS
FDVNDSPAFEVPLNSVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNILSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFTKDEDISLTLNMSEDEVEKRYE
GKLSKNMNGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQKNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGVKEGMKGAEGYSDSDEDTHDAYLERMKQEGKIREEADGSDESEGDSDESF
NPGEEGDEVAEEYDSNASESESEGEDGESEDEGKKKKVEKKPKKVVKEKKERKPRKEKKV
KDPGAPKRPMSGYMLWLNGNRERIKSENPGISVTEISKKAGEMWKLLGKERKEEWAKKAE
EAKRQYEKAMKEYKATGGGASADIKEKKKKGGKVDAKKSGGEKERKRESVNESFKSKEFI
SSEESSSESDNRKGGKGGKGSKRKASNDDDEEEEEILSTPPSSGDESGSD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaacgagatctatcaagaagcaaagggttcatggaatgat
ggcagactaaggttcggaaagcagtctgtggtctataaaagcaataagacggggaaggtg
gacagtattcaagccaatgaactctctgttggccagtggcgtcgggtctgtctgggtcat
gggattaaactgaccaccagctccggacacgtctacaaatatgatggctttaaagacaca
gattttgagaagctttctgcattttttaaaacgaactacaagctcgagttgacagagaag
gatatgtgtgtgaaaggctggaattggggcacggccaaatttgcagggccgctgttatcg
ttcgacgtgaacgacagtcccgcgtttgaggtcccactgaacagcgtttcccagtgtgca
actggaaagaacgaagtgacattggagttccatcagaacgatgatgcggaggtgtcgctc
atggaggtccgcttctatgtcccacccaacactggagatgatggatcagaccctgtggag
gcattcgctcagaatattctgtcgaaggcagacgttatccaagccactggagatgctgtg
tgtatattcaaagagcttcagtgccttacaccgagaggaaggtatgatatccgtatctac
ccctctttcctccacctgcacggtaagacgtttgactataagatcccctacacaactgta
ctgcgtctcttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtcta
gacccacccattaaacagggtcagacgcgctatcacttcctcattctccttttcaccaaa
gatgaagatatcagcctgactcttaacatgagcgaggatgaggtggagaagcggtatgaa
gggaagctcagtaagaacatgaacggtcctctttacgagattgtcagtcgggtcatgaag
gctttagtcaaccgaaagatcacagtgcctggaaactttcaaggtcattcaggatctcag
tgtataacgtgtgcgtataaagcgagctcagggctgctgtatccactggagagaggcttc
atctatgtgcacaagcccccggttcacctgcgctttgaggagatctcctgtgtcaacttt
gctagagggaccaccaccacccgctcctttgactttgaaatagagaccaagcagaaaaac
cagtacaccttcagcaacattgagagggaagaatatgggaaactctttgactttgtcaat
gcaaagaaactgaacatcaagaacagaggagttaaagagggtatgaaaggcgctgaaggg
tacagcgattctgatgaagacacgcatgacgcctacctggagagaatgaaacaagagggc
aagatcagagaggaggcggacggaagcgacgaatcagagggcgacagcgatgagtctttt
aaccccggagaggagggtgatgaagttgcagaagagtatgacagtaacgcctcagagagc
gaaagtgaaggagaagatggagaaagtgaggatgaaggcaagaagaagaaagtagaaaag
aagcccaagaaagtggttaaggaaaagaaagagagaaaaccacggaaagagaagaaagtg
aaggaccctggtgctcctaagaggccgatgagcgggtacatgctgtggctcaacggcaac
cgagagcgaatcaagagtgagaatcctgggatctcggtgactgaaatctcaaagaaggct
ggagagatgtggaaactactggggaaagaacggaaagaggagtgggcgaagaaagcagaa
gaggccaaaagacaatatgaaaaagctatgaaagaatataaagcgactggaggtggtgcg
tctgctgatatcaaagaaaagaaaaagaaaggaggcaaggtggatgctaagaagagtgga
ggagaaaaggagcgaaagagggaaagtgtgaacgaaagctttaagagcaaagagttcatc
tccagtgaggagagctcatcggaatctgacaaccgcaaaggcggcaaaggcggtaaaggc
agcaagcgcaaggcttctaatgatgatgatgaggaggaagaggaaatcctctccacgcca
cccagctctggagacgagtcggggtctgactaa
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