Triplophysa dalaica: 130438396
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Entry
130438396 CDS
T09616
Symbol
pcdh18b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-18b
KO
K16499
protocadherin delta 2
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130438396 (pcdh18b)
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Protocadherins
130438396 (pcdh18b)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
TMEM154
Motif
Other DBs
NCBI-GeneID:
130438396
NCBI-ProteinID:
XP_056626277
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All DBs
Position
16:complement(7373479..7379223)
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AA seq
1159 aa
AA seq
DB search
MGTTKHSRDVLFCKKLLKVILLAAVAHIVSGKTLKYKVLEEQRVGTVIARLKEDVASVLS
KLPSSVSPRFRAMQRGSTPLLSVREEDGEISIGTKIDREKLCEKNLNCTIEFDVITLPTE
YLQLFHIQVEVLDINDNAPQFSRAIIPIEISESASVGTRFPLDSALDPDVGENALHTYSL
TRNNFFKIDIRTRTDGARYADLVVMRELDRETQSSYQLQLTASDSGVPPKSGSTLLKISI
SDSNDNSPVFDEQAYVVNLLENSPQGTLLVDLNATDPDEGNNGKIVYXFSSHVPAKILET
FKINPDNGHITLIKKVDYETTPSYEIDVQAQDMGPNSIPGHCKIIIKVVDVNDNKPKINI
NLMTQGKEEVAYISEASPVDTFIALVRVDDIDSGVNGEVVCRLHGHGHFRLQKTYENNYM
ILTNVSLDREKRSEYSLTVIAEDHGTPSLSTTKHFTVQVQDENDNPPRFEKSRYEIFKSE
NNSPGAYLTSVMATDPDLGTNGQVTYSIVESQVQDSSISTYVTIDPSTGAVYALRSFDRE
DVGRLSFTVQARDSGSPASLSSNATVLLTVLDENDNPPIIVSPSLSNHTAEVPLWRHAEP
GHLVTIVKATDRDAGANSELTCSIIAGNDDGLFVIDPRDXELRTNGSVEVSGREGFDLTI
LVQDRGASNRLSARAVLHIALRDFPESYSLNPSDLNNQSSLDISMIIIISLGAICGVLLI
VMVLFATRCSREQKDPRHSYNCRVAESTYQNHPKKPARQIHKGDITLVPTVNGTLPVRAH
PRSPSASPAPESRQSHHSRQSLNSLVTISSNHVPENFALELAHATPPVEQVSQLLSILHQ
GQYQPRPSFRGNKYTRSYRYALNEMDKFSLKDSGRGDSEAGDSDCEMGRESPLLGEGFGE
LFTPDGHHRLHPSMKLCTEECRVLGHSDQCWMPQLASPASSDYRSNLYIPGEDPQQKATP
EAPQSGESTLRKKSFSTFGKENEEGEGEAGDGEDLCGTTSLLSEMNSVFQRLLPSSLDSY
NETSETEKTTGCAPGAGSLERRKGHLPGKPSTATYQQGVAVWAANTHFQNPGHGHPPASH
MTAMVAPLPAPLPAPIPTSSSTSKWLPAMEEIPENHEEDELESVLGHLHGKRCDSRSEIM
DASELVAEINKLLQDVRQN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgactaaacactcaagggatgtgctgttttgtaaaaagctcttgaaagttata
cttttggcggccgtggcacatatcgtctcaggtaagactttaaaatataaagttttggag
gagcagagagttggtacggtgatcgccagactgaaagaggatgtagccagcgttttatcc
aaactcccgagctccgtgtccccgcggttccgcgccatgcagaggggcagcaccccattg
ctctctgtgcgcgaggaggacggcgagatcagcatcggcaccaaaatcgaccgggagaag
ctttgcgagaaaaacttaaactgcactatcgagttcgacgtgatcacccttcctacggaa
taccttcaactgtttcacattcaagtggaagttttggacatcaacgataacgctccgcag
ttctctcgcgccatcatacccatagagatatccgagagcgcatcggtgggaacgcgcttt
cctttggatagcgcgttggacccggacgtcggggaaaacgcgctgcacacgtactcgctc
acgaggaataactttttcaaaatagatatcaggacgcggactgatggcgctaggtacgcg
gacctagtggtgatgagggaactggacagagaaacgcagtccagctaccagctgcagctc
actgcctcggactctggcgtgccgccgaaatctggctcaactctgcttaaaatcagcatt
tctgattccaacgataatagcccggtgtttgatgagcaggcttatgtggtcaacctattg
gaaaattccccacagggaacgctactggtggatcttaatgccacagacccggatgaaggc
aacaatggcaaaatagtgtacntcttcagcagtcacgtgccagcaaaaatcttagagacc
ttcaagataaacccagacaatggccacatcacactgattaagaaagttgactatgaaacc
actccttcatatgaaatagatgtccaggctcaggatatggggccgaactcaattccaggt
cactgtaagataatcatcaaagtggttgacgtcaacgacaacaagccaaaaatcaacatc
aacctcatgactcagggcaaagaggaggtggcctacatctcagaggcatcccctgttgat
actttcatcgcattagtgcgcgtggacgacattgactcaggtgtcaatggtgaggttgtg
tgccgtctccacggccacgggcattttcgcttgcagaagacctacgaaaacaactacatg
attcttactaatgtgtctctggaccgtgaaaaacgctctgaatatagcctgacggtgatt
gctgaagaccacggcacaccaagtctatccactaccaaacacttcacagtgcaggtccag
gatgaaaacgacaaccctccacgctttgaaaagagccgatatgaaatatttaagtctgaa
aacaattcgccaggagcatatctgacctcagtgatggccactgatccagatctgggcact
aatggccaggtgacctactctattgtggagagccaggttcaagacagctccatatcgaca
tatgtgactatcgacccatccactggggccgtgtatgcactccgaagctttgatagggaa
gacgtgggccggctctcatttaccgtgcaggcacgagatagtgggagcccagcgtctctt
agcagcaatgccactgttctactcactgtactggatgaaaatgacaacccacccatcatt
gtttcaccatccctaagcaaccacacagctgaggtgccattatggaggcacgccgaacca
ggtcatctggtaacgatcgtcaaggcgacagatcgtgatgcaggggccaacagcgagctg
acttgctccatcattgctggtaatgatgacggactttttgtcattgacccacgagatngc
gagttacgcaccaacggaagtgttgaggtctcaggtcgcgagggatttgatcttacaatc
ctggtgcaagacagaggggcctcaaatagactctcggccagggccgttctccatattgct
ctacgcgactttccggagagctactcactgaatccttcagaccttaacaaccaatcctct
ctagatatttccatgatcatcatcatctcccttggtgccatctgtggtgtgcttctcatc
gttatggtcttgtttgccacccggtgctccagagaacagaaagacccccgacattcttat
aactgcagagttgctgagtctacctaccaaaaccatcccaaaaaacctgccaggcagatc
cacaaaggggacatcacattggtccccacagttaacggaactcttcctgtgagggcccat
cctcggtccccctcagcatcccctgctcctgagagccgccagagtcatcatagccgccaa
tcactcaacagcttggtcacaatatcctccaatcacgtgccggagaactttgcactggaa
cttgcccatgccacaccaccggtcgagcaagtctcacagcttctgtccatacttcatcag
ggccagtaccaacccagacccagtttccgtggcaacaaatacacccggagctacaggtat
gctctaaatgagatggataagttcagcctgaaggacagtggcagaggggatagtgaggcg
ggagacagtgattgtgagatgggaagagagtcccctctgctcggagaaggctttggtgaa
ctcttcacacctgatggacatcaccgacttcatccatcaatgaagctatgcaccgaagag
tgtcgtgttctcggccactcggaccaatgctggatgcctcagttggcctctccagcatct
tcagattaccgtagcaacctctacatccccggtgaagacccccagcagaaagccactcct
gaagcaccgcagtccggagagtcgacgcttaggaagaaaagtttctccacctttggcaag
gagaatgaggagggagagggagaagcaggagatggggaagatctgtgtggaacgacttct
ctgctgtctgaaatgaacagcgtgttccagaggctcctcccatcttctttggactcttac
aatgagaccagtgaaactgaaaagacaacaggctgtgcaccaggagcaggctcacttgaa
cgaaggaaaggtcacctgcccgggaagccaagcactgccacctatcagcagggcgtcgca
gtttgggccgctaatacacactttcaaaatcctggacatggtcaccctcctgctagtcac
atgacagcgatggtggctccacttcctgcccctctgccagctcctattccaacatcatct
tccacctcaaaatggctgcctgcaatggaggaaataccagagaatcacgaggaggatgag
ttggagtctgtgctgggacatctgcacggaaaacgctgcgacagtcggagcgaaattatg
gacgccagcgagctggttgcagagataaataaactcctacaggatgtccggcagaactaa
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