Triplophysa dalaica: 130438499
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Entry
130438499 CDS
T09616
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130438499 (rnf4)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130438499 (rnf4)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130438499 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-rbx1
zf-RING_4
zf_RING_Vps8
Prok-RING_4
zf-C3HC4_4
zf-UDP
RING_XB3-XBAT31
zf-RING_10
FANCM-MHF_bd
zf-RING_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130438499
NCBI-ProteinID:
XP_056626411
LinkDB
All DBs
Position
16:complement(18195259..18199545)
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AA seq
221 aa
AA seq
DB search
MSNTTQRKRRTTSCSRRNNSKRSQNQVSVMETIDVLENENERTNSEDVVDLTCEGLEPAV
VDLTNNDSIVVSSEFINLFFHFDVTCFYCTMEFLLMTPLSVFSLACGRKVVEDGVQNRGA
QGTESYVLSSDEEEESSLRLSPGLLSSLQASSQARSTPGAVSCPVCMDAYSEIIDSGRLM
VSTKCGHLFCSQCIRDSLSRAHSCPTCRKKLTHKQYHPIYI
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatactacacagaggaaaagacgaacaacttcatgctcaagacgtaacaacagc
aagaggagccagaatcaggtgtctgtgatggaaaccattgatgtgcttgaaaatgaaaat
gaaagaacaaacagtgaggatgtggttgatttaacatgtgaagggttagaacctgcagtt
gttgaccttaccaataatgattctattgtggtgagttctgagttcattaacctttttttt
cattttgatgttacctgtttctattgtacgatggaattccttttaatgactcctctttct
gttttctcattggcttgtgggagaaaggttgtggaagatggtgtgcaaaatcggggcgca
cagggcacagaaagttatgtacttagcagtgatgaagaggaagagtccagtttaagactc
agtccaggcttactctcctctctacaagccagctcccaagccaggtctacaccaggggca
gtaagctgtcctgtttgcatggatgcttattcagagattatcgatagtggacggctcatg
gtttccacaaaatgtggtcacctcttctgcagtcagtgcatacgggactctctcagtaga
gctcacagctgtcccacttgtagaaagaaactcacacataaacagtatcaccctatatat
atctaa
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