Triplophysa dalaica: 130438555
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Entry
130438555 CDS
T09616
Symbol
eme1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03440
Homologous recombination
tdw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130438555 (eme1)
03460 Fanconi anemia pathway
130438555 (eme1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130438555 (eme1)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130438555 (eme1)
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Gene cluster
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
130438555
NCBI-ProteinID:
XP_056626457
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Position
17:8687018..8694174
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AA seq
562 aa
AA seq
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MTCINRPGFLMSDSDSSDSEQLPVFDFSQSKFKQTELVVLDHSDSEMAPVNKPVTSEVRC
PGGAAGSDVLMVSSDSEEEEAMIPLAVRLKQKQRDLASAVIVPEKSQASSSLSNGRSQLL
NVPVTLPPLYISVLEDQPVERSKNCTNITRQFSSVYNAPYLTEEPPPAAENGTHLAKRKK
TPAEVEAARQEALRKRATREQQQEEKERLRLEKKAMADAVKALRPEECIKHMVVTVDPGL
LQLEGGGALLTSLHALGCSCAIEKQSLPRSVTWARHSPCQQTGEMMTIPESHTVIQVPLD
DFVTMINNFCKKQSDGVLTESGISLTSWIRVLMSKNPGRTVSMVVIDIEKYFKSQNSKCQ
KKYREAVLGEEKDAGLEGGQKKRRKKDDIKQLPNVSRVQVEEALVDLQLNTGVQVRFLST
WKDFTDFITMSTKAVAEAPFKRERENTGFTFCLESEWSGGHKVDRAGNGLLQVWKRQIQQ
LNRVSPDMASAILSVYPSPQVLVQAYARCKTEQEKVGLLADMLIRRGEGVTSTTRRVGPE
LSKRLYLLMTSSDSQQPLDSTV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgacctgcatcaatagacctggatttctcatgagtgacagtgactccagtgattcagaa
cagctgcctgtgtttgacttctcacagtcaaaattcaaacagactgaactggttgtttta
gaccattcagactccgaaatggcccctgtcaataaaccagttacatcagaagtccgttgt
cctggtggagctgctggaagtgatgtcttaatggtaagcagtgacagtgaggaagaagag
gccatgattcctttggctgttagactaaagcagaaacagcgtgatctggcgtcagcagtc
attgttcccgaaaagagccaagcttccagttcactttctaatggacgttcacagctctta
aatgttccagttacattacccccactgtatatatctgtgttggaggaccagccggtagaa
cgtagcaagaactgtaccaatataacaaggcagttcagctctgtctacaatgcaccatac
ctcacagaagaacctccccctgcagcggagaatggcactcacctggccaaacggaagaaa
acccctgcagaagtggaggctgccagacaggaagccctgaggaaaagagcaacgagagag
caacagcaggaagagaaagagagactgagattggagaagaaagctatggccgatgctgtt
aaagccttaaggccagaggagtgcatcaaacacatggtggtgacagtggacccaggactg
ctgcagctggaaggtggcggtgccctcctgacatctctgcatgccctgggctgcagttgt
gccatagagaagcagtctcttcctcgcagtgttacctgggctagacactcaccctgtcaa
cagactggagagatgatgactattccggagtcacatactgtaatccaggttccgctggat
gactttgtgaccatgattaacaacttttgcaagaagcaaagtgatggtgtgttgactgaa
agtggcatatctctgacctcctggatccgagtgctaatgagcaagaacccaggcaggact
gtcagtatggtcgtgattgacatagagaaatactttaaatcccagaattcaaaatgtcag
aagaaataccgtgaggcagtgctgggcgaggagaaggatgcaggacttgagggagggcag
aaaaagagaagaaagaaagacgatatcaagcagcttcccaatgtctcacgagtacaggtg
gaggaggctttggtagacttgcagctgaatactggggtgcaggtccgtttcctatcgacc
tggaaggactttactgattttattaccatgtcgaccaaggctgtagcagaggcgccattc
aagcgagagcgagagaacacaggtttcactttttgcttggagagtgagtggtcaggtggt
cataaggtggaccgggcagggaatggcctactgcaggtttggaagaggcaaatccaacag
ctgaaccgcgtcagccctgatatggccagtgctatactcagcgtctatccttctcctcag
gttctggttcaggcatatgcacggtgtaaaacggagcaagaaaaagttggcctgctggca
gacatgctgattcgccgcggagagggcgttacatcgacaacccgcagagtaggtccggag
ctttccaagcggttgtatcttttgatgacatcatctgattcccagcagccccttgattcc
actgtgtag
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