Triplophysa dalaica: 130438794
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Entry
130438794 CDS
T09616
Symbol
trim65
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM65
KO
K12031
tripartite motif-containing protein 65
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130438794 (trim65)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130438794 (trim65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_5
zf-B_box
zf-Nse
zf-ANAPC11
cas_Cpf1_2nd
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
130438794
NCBI-ProteinID:
XP_056626955
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Position
17:complement(20890816..20895929)
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AA seq
515 aa
AA seq
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MEDHTQCTICYEQFKIPVTLRCGHTFCKECISKFWDGKQRKDQVLQCPMCNHIFETRPLL
NRNVSLSMITEAVAASSPVKRDVTTGASVHTEPEELCRRHQKPLVIYCRNDSMCVCYECA
VNECKGHDQILVEEERKNREAGLKGKCEEIVKQQEAVERCCLELKENMAETKVSLQQTSQ
WVIGKFSHLIKVLAEKEEVTQRFLEQQQDVTVLRAEKRLAVLEERQKQLAALQQEITSLC
SLPHCQLIKESRLIDVPHFNEVPVDANTCLQEKLNPVTDVLSRVSKLVCEDLERAVQAFA
GHEKEGSPHDKRPILAVVPSPASSSSSYPAEREGHRAYHCSLTFDPRTANAHLRLSRGNR
RAEHLTSGPRPVPTDKSRFDHTWQVLCFESFKEGQHYWELEVSKPWAYVGVTYPNIPRKE
KGKCCMVGMNELSWSLQLDEHQLSAWHAGCKEPVAGRLAANSLSLRIGMLLDYEAGTLTY
YQGQVRLHAFHCAFTQELFPACWIGEGVTVTLCEP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcacacgcagtgcacaatctgctatgaacagtttaaaatcccagtgaccctc
cgatgtggtcacaccttctgcaaggaatgcatctcgaaattctgggatggcaagcagaga
aaggatcaggtcctccaatgccccatgtgtaatcacatctttgagacgaggcctctgctc
aatcggaacgtgtctctctctatgataaccgaggcggtggcagcaagcagtccggttaag
agagatgttactacaggagcatccgttcacacggagccggaggagctgtgcagacgtcat
cagaaacctctggtcatttactgcaggaacgacagcatgtgtgtgtgctatgagtgtgcg
gtgaatgagtgcaagggccacgatcagatcttggttgaagaagaacgaaagaacagagag
gcaggattgaaagggaagtgtgaagaaatcgtgaaacagcaagaagctgttgagagatgt
tgtctggagctcaaggaaaacatggccgaaacaaaggtgtcattacagcagacgtctcag
tgggtgatcggcaagttctctcatctgataaaggtgttggcagagaaagaggaagtgaca
cagcgttttctggagcagcagcaagatgtgaccgtgctgcgggctgagaagaggctggct
gtgctggaggagagacagaagcagctcgcagctcttcagcaggagatcacgagtctgtgt
tctcttcctcactgccagctcatcaaggagtccaggcttatagatgtcccacacttcaat
gaagttcctgtggatgcgaacacatgccttcaggagaagctgaaccctgtcacagacgtt
ctgtctcgcgtctctaagctggtgtgtgaagatctggagagagccgtgcaggcgtttgca
ggacatgagaaggaaggttctccgcatgataagaggcccattcttgctgtcgttcccagt
cctgcatcctcatcatcatcgtatccggctgagagggaggggcatagagcataccattgc
agcctgacctttgaccctcgcaccgccaacgctcacctgcgtctttcccgtggtaaccgt
agggcggagcacctcacctccgggccccgcccggtccccaccgacaagtcgcgcttcgat
cacacgtggcaggtgttgtgtttcgagagcttcaaggaaggtcagcattactgggagctg
gaggtgtccaaaccgtgggcctacgtgggcgtgacgtaccccaacatcccacgcaaagag
aagggcaaatgctgcatggtgggcatgaacgagctgtcgtggagcctgcagcttgacgaa
catcaactgagtgcttggcatgccggatgcaaggagcccgtcgcaggtcggcttgcagct
aactcgctgtcgctgcgcatcggaatgctgctggactacgaggccggaacgctcacctac
taccagggacaggtgcgtctgcacgccttccactgcgctttcacacaggagctgtttcca
gcgtgctggattggggaaggtgtcactgttacgctctgcgaaccctga
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