Triplophysa dalaica: 130439152
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Entry
130439152 CDS
T09616
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
130439152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130439152
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130439152
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Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Lig_chan
Motif
Other DBs
NCBI-GeneID:
130439152
NCBI-ProteinID:
XP_056627582
LinkDB
All DBs
Position
17:complement(21696550..21770011)
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AA seq
1249 aa
AA seq
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MADGRRRALPRSPETRPMLPTEEDQARDGDEKRLSTIMTNFIHDSKAGPSSVRKMDVIIP
YTSDVPCDTNGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWRVCCHCRGKRKDVQRVC
NPAVIGDGGIKGGGDAVVAPSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALV
IYFIDSSDPIESCHDFEKNYTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFF
TVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNLLKTSNSIKLVNLCSIFISTWLT
AAGFIHLVENSGDPWENFQNSQALSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFI
LGGLAMFARYVPEIAALILNRKKYGGSYNSTRGRKHIVVCGHITLESVSNFLKDFLHKDR
DDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANK
YCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAE
LKLGFIAQSCLAQGLSTMLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGM
SFPTVCELCYVKLKLLLIAIEYKSDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRA
LFYCKACHDDITDPKRIKKCGCKRSKSNYNGYIKSIVEEEHSTLSPKKKQRNGGMRNSPT
CSPKTIRHDPLLVTGHDQMETMDENIKKYDSTGMFHWAPSKDIERVVLTRSEAAMTVLSG
HVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKPIVFVGSLEYLKREWETLHNFPKVS
ILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDVSLQDKECILASLNIKSMLFDDSIG
LLQANSQGFTPPGMDRSSPENSPVHGLVRQVSTTTGANIPIITELAKTDKLLPLVSLSQD
KSSGNNIPMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYF
NDNILTLIRTLVTGGATPELEGLLAEENALQGGYSTPQTLANRDRCRVAQLALYDGPFAD
LGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGSPSQCTKRYVITNPPYAFELVSTDLI
FCLMQFDHNAGHTRSNLSTHSTHCPSKKSPSTHSIPLSARPGRSRSRDKQNATRTNRSVS
EKNWYTDECENTFRTPQIKHTNTQSANQVNQYKSTSNIIQPIREVEEEP
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtcggcgcagggcgctgccgcgatctccagaaacgcgcccgatgctgccc
actgaagaggatcaagcgcgtgatggtgatgagaagcgcctctccacgataatgaccaac
ttcatccacgattcaaaagcgggtccgtcctcggtgcggaagatggacgtgatcatcccg
tacacgtccgacgtgccctgcgacacgaacgggcagcgcatgtggtgggcattcctcgcc
tcctccatggtgactttcttcgggggtcttttcatcattctgctgtggagaactctcaag
tacctgtggagggtgtgctgtcactgcaggggtaaacggaaggacgtgcagcgagtgtgt
aatccagccgtcatcggtgatggtgggattaaaggaggaggggatgcggtggtggcgccc
agcgaggtgggctggatgacctcggtgaaggactgggcgggggtcatgatctctgctcag
acgctcactggacgcgtgctggtggtgcttgtgtttgctctgagcatcggcgctctcgtc
atttacttcattgactcttctgaccctattgagtcctgtcatgatttcgaaaagaactac
acgttacagatcgacatggccttcaacgtcttcttcctgttgtacttcggactgcgtttc
atcgcagccaatgataagctgtggttttggttggaggtgaactctgtggtggatttcttc
accgttcctcccgtgtttgtgtccgtgtatctgaacaggagctggctgggcttgaggttt
ttacgggcgctcagactgatccagttctcagaaattttgcagtttttaaatttattaaaa
acaagcaactccatcaagttggtgaatttgtgctcaatcttcataagcacatggctgaca
gcggcaggcttcatacatctggtggaaaactcaggagatccttgggaaaacttccaaaat
tcccaggcactttcctattgggaatgtgtgtacttactcatggtaaccatgtcaacagtg
ggttacggcgacgtgtgtgctaaaaccaccctcggacgacttttcatggtcttcttcatt
cttggaggattggcaatgtttgctcgctacgtgcctgaaatcgctgctctcatccttaat
cggaagaaatacggagggagttataactcgacccgaggacgaaagcatatagtggtgtgt
ggtcacatcacactggagagcgtctccaacttccttaaagacttcctccacaaggacagg
gacgatgtcaatgtagaaattgtttttcttcataatatctcacctaatcttgaattggaa
gccttatttaagagacacttcactcaggtggagttttaccagggatctgttcttaaccca
cacgacctcgctcgggtcaagatcgagtcggctgatgcctgtctgatcttagctaataag
tactgcgcggaccctgatgctgaggacgcctccaatatcatgagggtgatatccatcaaa
aactaccatccgaagatcagaatcatcacacagatgcttcagtatcacaataaggcccat
cttctgaacatcccgagctggaactggaaggagggtgatgatgccatctgtctggccgaa
ctgaagctgggtttcatcgctcagagctgtctggctcagggtctgtccaccatgctggcc
aacctcttctccatgaggtcctacatcaagattgaagaggacacgtggcagaagtattat
ttagagggagtggccaatgaaatgtacacagagtatctgtccagtgccttcgtgggtatg
tctttccccaccgtttgcgaactctgttacgtgaaactcaaactcctgctgatcgccatc
gaatataaatcagaccagagagagagcagcacgctgattaacccgggcaatcatgtgaag
atgcaggagggcacgctgggattcttcatcgccagtgatgccaaagaagtcaagagggca
cttttctactgtaaagcctgtcacgatgacatcacggacccaaaacggatcaagaagtgt
ggatgtaaacgctctaaaagtaactataacggatacatcaaatcaatagtggaggaagaa
cactcgactctgtcacccaagaagaaacagcgtaacggaggcatgaggaactctcccacc
tgctcgcccaaaaccatcaggcacgaccctctgctcgtcacaggacacgatcagatggaa
acgatggatgagaatataaagaaatacgattcgactggaatgttccactgggctccatca
aaagacatagagagggtcgttctgaccagaagcgaggcggccatgacggttctgagcggt
catgtggttgtgtgtatcttcggggatgtgaagtcggctctgattggtcttcgtaatctg
gtcatgcccctgagagcgagtaacttccactatcatgagctaaagcccatcgtgtttgtg
gggtctctggagtatctgaagagggagtgggagacgctacacaactttcccaaagtctcc
atcttacccggcactccactgagtcgagctgatctgagagcggtcaacatcaacctgtgt
gacatgtgcgtcattctgtcagccaatcagaacaacatcgacgacgtctcgctacaggac
aaagagtgcattctggcatctctcaacatcaagtccatgctgtttgatgacagcatcggt
ctgctgcaggcaaactcgcaaggttttacacctccggggatggatcgctcgtctccagag
aacagtccagtacacggactggtgcgccaggtgtccacaaccacaggagcaaacattccc
atcatcacagagctcgccaaaacagacaagttgctgccactggtttctctgagccaggac
aagagcagcggaaacaacatcccaatgataacagaactggtgaacgactcaaacgttcag
tttctggaccaggacgatgatgacgatccagacactgaactgtacctcacacaacccttc
gcctgcgggacggcgtttgccgtcagtgttctggactcgttaatgagtgctacgtacttt
aatgataatattctgactctgatccggacgctggttaccggaggtgcgacgccggagctg
gaaggtttgctggcagaggagaacgccctgcaggggggttacagcaccccacaaactctg
gctaacagagaccgctgtcgggtcgctcagctggcgctctacgacggacccttcgcagat
ctcggggatggtggatgttacggtgatttgttctgtaaagcgttaaagacatacaacatg
ttgtgttttggtatctatcgcttgagagacgctcacttgggaagccccagtcagtgtact
aaacgatatgtgatcacaaacccaccgtatgcgtttgagctggtgtctactgatctcatc
ttctgcctgatgcagttcgaccacaacgccggccatacccgcagcaacctgtccactcac
tccacccactgcccgagtaaaaagagcccgtccacccactccatccctctctctgcccgg
ccgggtcgcagccgcagtcgagacaaacagaatgcgaccaggacgaatcgaagcgtgtca
gagaaaaactggtacacagacgaatgtgaaaacaccttcagaaccccgcaaatcaaacac
accaacacacagtcagccaatcaggtgaatcaatacaaatccaccagcaacatcatccag
ccaatcagagaagtggaggaggagccatga
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