Triplophysa dalaica: 130439428
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Entry
130439428 CDS
T09616
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130439428 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdw03021
]
130439428 (smarcd2)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130439428 (smarcd2)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130439428 (smarcd2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130439428 (smarcd2)
PBAF complex
130439428 (smarcd2)
GBAF(ncBAF) complex
130439428 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130439428
NCBI-ProteinID:
XP_056628025
LinkDB
All DBs
Position
17:17456458..17464075
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AA seq
499 aa
AA seq
DB search
MASRSGFALNSSTPINPNMNLGHSAMRMTAMPQNSPYRGMATTLNQYHQRPSMPPSRGVT
MVGMGPMGSPMPGPSYGGGMQMRPGMSQALMDPTRKRLLQQQQPGGLMGHRRGVKRRKMA
DKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLRIYISNT
YTPAKPDGEEAEKVASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGPDNHLVE
WHRMPATQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRASIMQ
ALWLYIKNNKLQDCHEKEFINCNRYFRQIFGCPRMRFSDIPMKLAGLLQHPDPIVINHSI
SVDPNDQKKTACFDIDVEVDDPLKAQMTSFLSSTTNQQEIAALEMKVIHDTIESINTLKT
QRDFMLSFSNNPQEFIQDWLKSQSRDLKMMTDTVGNPEEERRTEFYQAPWVTEAVGRYVF
SKVQQRRQELEQVLGIRLS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagatcgggtttcgccctcaattccagcaccccaataaaccccaacatgaac
ctgggtcacagcgctatgagaatgacagcaatgccgcaaaattccccctacaggggtatg
gccaccacactgaaccagtaccaccagcgcccaagtatgccacccagccgaggggtgaca
atggtgggcatgggtcctatgggctcacccatgcctggtccatcttatggtggaggcatg
cagatgcgacccggaatgtcacaagccctgatggaccccacacggaaaagactgcttcag
caacagcagcccggtggtcttatgggtcatagaaggggagttaagcggcgtaagatggct
gacaaagttctcccacagaggatcagagatctggtcccagagtctcaggcctacatggac
cttctggcctttgagagaaagctggaccagaccatcgctcggaaacgcatggagatacag
gaggccatcaaaaagcctatcacgcaaaagcgaaaactgaggatctacatatccaacact
tacacacctgccaaaccagacggggaggaggctgaaaaagtggcatcttgggaactcaga
gtggagggcaaactcctggaggacccaggaaaacagaagagaaagttttcatccttcttc
aaaagcttggtcattgaactggacaaagaactctatggaccagacaatcacctggtggag
tggcacagaatgcccgcaactcaggagacggatggctttcaggtgaagagaccaggagat
gtgaatgtgaaatgcactctcctccttatgctggaccatcagcctccacagtataagcta
gatcctcgtctggctcgacttttgggcgtccacactcaaaccagggccagtatcatgcag
gccctgtggctctacatcaaaaacaacaagctccaggactgccatgagaaggagtttatt
aactgcaacagatacttcagacagatttttggctgtcccaggatgaggttttctgatatc
cccatgaagctcgcaggccttctgcagcatcctgaccccatcgtcatcaatcactcaatc
agtgtggatcccaatgaccagaagaagacagcgtgctttgacatcgatgttgaggtggac
gacccgctgaaggctcagatgaccagctttctgtcatccacaaccaatcagcaggagatc
gctgccctagagatgaaggtgatccacgacactattgaatccatcaacacgctgaaaacc
cagagagacttcatgctcagcttcagtaacaacccgcaggagttcatccaggactggctc
aagtctcagagccgagacctgaagatgatgacggacactgtcgggaacccagaagaggag
aggaggacagagttttaccaagcaccctgggtcacagaagctgttggacgctatgtgttt
tcaaaggtccagcagaggagacaggaattggaacaggtactgggaatccgactctcataa
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