Triplophysa dalaica: 130439793
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Entry
130439793 CDS
T09616
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130439793 (ddx20)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130439793 (ddx20)
Spliceosome [BR:
tdw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
130439793 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
130439793
NCBI-ProteinID:
XP_056628313
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All DBs
Position
18:complement(10283056..10287876)
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AA seq
766 aa
AA seq
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MATSTKAAHELQVRTRTDDVLNNDGLEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLG
RCGLDLIVQAKSGTGKTCVFTTIALDSLILENTVTQVLVLAPTREIAVQIHAVVMAIGSS
MEGLECHVFIGGRPVIQDKLHLKKCHIAIGSPGRIKQLIEMGALITSSVRLFVLDEADKL
LEDDSSSSFQEQINWIFSSLPTNKQMLALSATYPESLAQYLSRYMREPTFVRLNPTDPGL
IGLKQYYKIVPSHSLPHKIFEEKVQSLLELFSKIPFNQALVFSNLHSRAQRLADILSSKG
LPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETY
MHRIGRAGRFGTLGVAVTYCCHGEEENRMMAIAQKCSLNLTHLPDPIPPGIMEEACDWDV
IIEPPSKPTRKVPVSPKQAKKKQVKSEATSFKPSGVSHIPHPTEERRTSDISYNVAETKA
KNHSKPRLEKPLPSVTNLETRSTLAQTEQRETLPRIPSLPSFKLRAQKIMTFAEAEADYE
SFITEGPGRSVEIIRQYEGCNRSQNMFNGVHNKHDDHNDEDQGNNSHVPDASHSHQDPPL
PPDVSQLSYGSKISEDSLSSDDDSSSESEMEVECGSNSSVPNRCSQPRHPVDCNKDQRDH
SSLPAARIQTHYSRSKQTYSTLQSHDPPHHKGPSASKSSRKATTTPQRFTKEKTDDGEEE
EVAGQDNWNEYRAWVEYYNSYYHRSPYYWMRAFSSYSNYMMEMMKR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccacgaaagcagcgcatgagctgcaagtcagaacccggactgatgatgtt
ttaaataacgatgggctcgagttcagctctttactgctatcaaaacctgtgcttgagggc
ttatctgcctccggctttcagagaccgtcacccattcagctcaaagccatcccactgggc
agatgtgggctggatcttattgttcaagccaaatctggcacaggaaagacttgcgtgttt
actacgattgcattggactcccttatactggagaacacagtcacacaggtgctagtttta
gcccccactagggagattgctgtgcagatccatgctgttgtcatggcaataggcagctca
atggagggactggagtgtcatgtgtttattggtggacggcctgtcattcaagataagctc
cacctgaagaaatgccacattgctattggctcaccaggccgtattaagcagctcattgag
atgggagccctgatcacatcttccgttcgtctgtttgttttggatgaggctgataaactg
cttgaggatgacagcagcagcagctttcaagagcaaatcaactggatcttctcttctcta
ccgacaaataaacaaatgctggctctttctgccacctacccagaatccttagcacaatac
ctgtcaagatacatgagagagccgacgtttgttagattgaacccgacagaccctggactc
attggactgaagcagtactataagatcgttccctctcattcattgcctcacaaaatcttt
gaggagaaggttcagagtcttctggaactcttcagtaaaatcccatttaatcaagcattg
gttttctcgaatctccatagcagagcccagcgcctggctgacatcctctcatctaaaggc
ctgcctgcagtctgcatctcaggtggtttaagtcaggatcagaggttagaagcgatgtgg
aagctaaagcaatatcaatgtcgagttttaatatcaacagatctgacgtcccgtggtatt
gatgccgagaaggtgaatttggtgattaatctggatgttcctcaggactgggagacgtac
atgcatcgtatcggtcgtgctggacgattcggcactctgggggttgccgtgacctactgt
tgccatggtgaggaggagaatcggatgatggccatagctcagaaatgttccttgaatcta
actcatttgccagatccaatccctcctggaattatggaagaggcgtgtgactgggacgtg
atcatcgaacccccttcaaaacccactcgaaaggttcctgtctcccccaaacaggcgaaa
aagaaacaagttaaatcggaggccacatcatttaaaccttccggagtttctcacatccca
catcccactgaagagagaagaacatctgatatatcatacaatgttgctgaaaccaaggct
aaaaatcactccaaacctaggctggagaaaccattaccttctgttacaaacctggagact
cgctcgactcttgctcagacagagcagagggagacccttcctagaattccttcactgcca
tcttttaaattacgggcacaaaagattatgaccttcgcagaggccgaggcggattacgag
agcttcataacagaaggtccaggaagatctgtcgaaatcattcgccagtatgaaggttgc
aacagaagtcagaatatgttcaatggcgtgcataacaagcatgatgaccataatgatgaa
gaccaaggtaataattcacatgttccagatgcgtcacactcccatcaagatcctcctcta
ccaccagacgtttcacagttgtcctatggttcgaagatttctgaagattccctgtcatct
gatgatgattcttcctccgagtccgaaatggaggttgaatgtggatcaaactcttcagtc
cctaatcgctgttcacaacccagacatcctgtggactgtaacaaagaccagcgggatcat
tcatctttaccggcggctagaatacaaacacattatagcagaagtaagcagacgtatagt
acacttcaatcccatgatcccccacaccacaaaggcccttcagcctccaaatccagcagg
aaggccacgacgacaccgcagaggtttacaaaggagaaaactgatgatggtgaagaggaa
gaagttgcagggcaggataattggaatgagtacagggcttgggtcgaatattacaactcg
tattaccacagatctccatattactggatgagagcattttcctcatattccaattacatg
atggaaatgatgaaacgttaa
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