Triplophysa dalaica: 130439922
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Entry
130439922 CDS
T09616
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130439922
04020 Calcium signaling pathway
130439922
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130439922
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130439922
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
130439922
NCBI-ProteinID:
XP_056628571
LinkDB
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Position
18:complement(5988333..6044969)
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AA seq
2309 aa
AA seq
DB search
MARFGDDVPGLLGPGDGGSERNRNREAPAVSTGGVSPAFKQTKAQRARTMALYNPIPVRQ
NCFTVNRSLFIFGEDNIVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPGEDKTPM
SKRLEKTEPYFIGMFCLEAGIKIIALGFAFHKGSYLRNGWNVMDFIVVLSGILATAGAHM
NISLDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGRLHSHCEAEADISGNETVDSSESEYPCGYRKCPLKYNCSGKWTGPNDGITQFDNI
LFSLLTVFQCITMEGWTTVLYNTNDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFA
KERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDVLKRAAT
IKRRGVDDVRRAPDEPYADISSVGMQLNRASIRSAKRGPTSYFRRKERMLRIYIRRMVKT
HSFYWIVLGLVALNTFCVAIVHHKQPQWLSSLLYYAEFLFLGLFLTEMFLKMYGLGPRLY
FHSSFNCFDCGVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVS
LMNSMKSIISLLFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTG
EDWNEVMYNGIRSQGGVKSGMWSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEEEEAFNQKHALQKAKEVGPMSSFMSSERRRRPYLYRKRAIHRSRAAYSFEDSESLANA
PPLNASNSFMSRRERRRRLTMSVWEQRTSQLRRHRQMSSREILFSSPSEEHDGAPGCQPQ
RKPGLSPSDSKKQAIETSATTALPEGTLEPPMPLDIPVDDKEQSLSIPEPPLDIPIPESP
VVVDMSLPEPPVTLNLPEPPESKTSPETTLDVNNHFPRLNGNRRQRAVRKYRPPAMGDTL
TPDMGPRPRRLRHREPHTDARGKETQQGEGAIDGGDHRSVNDEDESKSKNDGEIGSDSTA
AEQRKNKPEISESADPKPTITSPHKKQLQDSEPATLQLTDTLQQSPKATSCAGEMDKNNH
GSLNQEKSSLNTSMAIEVTDNQASMELISITGNNKDVEASKPEKLEENPNAPKGPPPVSM
FIFKPDNPIRRACHYIVNLRYFEMSILLVITASSIALAAEDPVNTNSERNKVLRYFDYVF
TGVFTFEMIIKMIEQGLILHDGSYFRDLWNILDFIVVVGALVAFALTMLVCFSFVSLSVV
LWLTASGRNVMGSTTGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNI
LIVYKLFMFIFAVIAVQLFKGKFYYCTDSSKDTEEECKGYYIDYDKDKKNKEKREWKRRD
FHYDNIVWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPIQGNRMEMSIFYVIYFVVFPF
FFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRQSFQYRLW
HFVVSPLFEYTVLTMIALNTIVLMMKHHEPRTAGYDDVLKHLNTAFTVIFSVECVLKILA
FGFTNYFRDTWNIFDFITVLGSITEIVVDQFSPKSGTFNMSFLKLFRAARLIKLLRQGYT
IRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEKSQINRHNNFKTFFGA
LMLLFRSATGESWQDIMLSCLGEKECETDMSLNNSTTKAIRKECGTDFAYFYFVSFIFFS
SFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGRIHYTDMYEMLTC
MSPPLGLGKKCPSKVAYKRLVLMNMPVDEDMSVHFTSTLMALIRTALDIKIARGGEDRGQ
MDIELQKEISVIWPHLSQKALDLLVPIHKASDMTIGKIYAAMMIMDYYKQNKAKKLRQQL
EEQKHAPMFQRMDASSLPQDILCSAKALPFLTHSAGSALTRGGFLALSPISPQDLFMQPV
AQESMEEREEYQHQYHLQTMVPEHKEFRAVLLPTSMQSDPLQVPGRGVSIRASSMPRLEI
EPQQVSLESKLMKRSFSTIGDQCVNGDWQEEFSLERVSPDRLERPRQRSFRAVRSNLREP
VDKERGRSKERRHLLSPDVSRCNSEERSQSQDRHHSRSPSEGRKHMSHRQGNTSVSPIPS
TSDSGTPRGRRQLPQTPSRPRPHISYSPLVCRAQPAPAESHSLTRPAEEGEEPIAAVVAH
STPHRYISEPYLPLQEDVNSLDLSGVEETLTFEAAMASSLGRSNTISSAPQLRHSWQVPN
GHFRKRLAQATSGTSGCELLSDTDEDDRC
NT seq
6930 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttcggagacgatgttcccggtctgctgggacccggggatgggggatcggag
cgcaatcggaaccgggaggctcccgcggtatccacaggtggagtttcaccagccttcaaa
cagaccaaagcgcagcgagcccgaaccatggccctgtacaaccccataccagtccgacag
aactgcttcactgttaacagatcgctctttatcttcggagaggacaacatcgttagaaag
tatgccaagaagataacagagtggcctccgtttgaatacatgatcctggccaccataatt
gccaactgcattgttctggccctggagcaacatctacccggagaggacaagacgcccatg
tcaaagagacttgaaaaaacagagccctacttcataggaatgttttgccttgaggctgga
ataaaaatcattgctttgggatttgcattccacaaaggctcgtacctgaggaacggctgg
aacgtcatggacttcattgtcgtcctgagcgggattctggccacggcaggagctcacatg
aatatttcattagacctgcgcacactgagagctgtgagggtcttacggcccctcaaactg
gtttctggcattcccagtcttcagatcgttctgaagtccatcatgaaagcgatggttcct
cttctacagatcggtctgctgctgttttttgccattctcatgttcgccatcattggactg
gagttctacagtggaagactccacagtcactgtgaagctgaagcagacatcagcggcaat
gagactgtggattcatccgagtctgaatatccatgtggatataggaaatgtcctctgaaa
tataactgctctggcaagtggacaggacccaacgatggcatcacccaatttgataacatc
ttgttttctttactcaccgtctttcagtgcatcacgatggaaggctggacgacagtactc
tataataccaatgatgccttaggccctacgtggaactggctctacttcatcccgctaata
ataatcggctccttctttgtgttgaatctggtattaggagtcctttcaggggagtttgcc
aaagagagggagcgtgtggagaaccggagagccttcatgaagctcaggagacagcagcag
atcgagagggagctaaatgggtatcgggcctggatcgaccgtgcagaggaggttatgctt
gctgaagagaacaagaattcaggcccttcggctttagatgtgctgaaaagagccgccacc
ataaagagaagaggggtagatgatgtccggagagctccggatgagccgtacgccgacatc
tcatctgtaggcatgcagttaaacagagcgagcatacgcagcgccaaaagaggaccaaca
tcatatttccgacgaaaggagcgcatgctaaggatctacattcggcgtatggtgaagact
cactccttttactggattgttttgggtctggtggccctcaacaccttctgtgtggccatc
gtacatcacaaacagcctcaatggttgtccagcctcctctactatgcagaatttctgttt
ttaggcctgtttctcactgagatgtttctgaagatgtatggactgggaccccgactatat
ttccactcctctttcaactgctttgattgtggggtgatagtaggaagcattttcgaggtg
ctctggggattcttcagacctggcacatctttcgggatcagcgtgttgcgtgccttacgg
ctgctgaggatcttcaagataaccaagtactgggcatccctgaggaatctggttgtgtct
ctgatgaactctatgaagtccattatcagtttgcttttcctgctgtttctcttcattttg
gtctttgcccttctaggcatgcagctctttgggggaaggttcattttcgaagactacacc
cccactaattttgacacttttccggcagctattatgacagtgtttcaaattcttactggt
gaagactggaatgaggtcatgtataatggcatacgctctcaaggtggtgttaagtcaggg
atgtggtcgtctgtgtacttcattgtcctgactctgtttggaaactatacgctcctcaat
gtcttcttagctatcgctgttgacaatttggccaatgcccaagagctcacaaaggacgag
gaagaggaagaggaggcgtttaatcagaaacacgctctgcagaaagccaaggaggtcgga
cccatgtcgtccttcatgtcttcagagagaagaagacggccttacctgtacaggaaacgt
gcaattcaccggagccgtgcggcctactcctttgaggactcggagagcctcgctaatgct
cctccgctcaatgcctctaactctttcatgtccaggagagagagaaggcgaaggttaacc
atgtcggtctgggagcagaggaccagtcagctgcgcagacacaggcagatgtccagccgc
gagatcctcttcagcagccccagtgaggagcacgacggagcacctggttgccagccccaa
cggaagcccggtctgtccccgtctgacagcaagaagcaagccatcgagacctctgcgacc
accgctctccccgagggcaccttagagccgcccatgcccctggatatacccgtggatgat
aaagaacagtccctgtctattccggaaccccctttggatattccaattccagagtctccc
gtggtagtggacatgtccctccccgagccaccggtcacactgaatctaccagagccgccc
gaatcaaagacctcacccgagaccaccctagatgtcaacaaccatttccccagactcaat
ggaaacaggcgtcagcgggcggttcgtaagtacaggcctcctgcgatgggggacacgctg
accccagatatggggcccaggcccagacggctacgtcatcgggaacctcacacggatgct
agagggaaagagacacaacaaggagagggcgccattgacggcggagatcacaggtctgtg
aatgatgaagatgaaagcaaatcaaagaatgacggagagatcggttcagacagcacagca
gctgaacagaggaaaaacaaaccagagatttctgaatcggctgaccccaaaccgaccata
acttcaccccacaaaaagcagcttcaggactcagagcctgcaacacttcagctgaccgac
acactccagcaatccccaaaggccacttcatgtgcgggcgagatggataaaaacaaccac
gggtccttaaaccaagaaaagtcctccctcaacaccagcatggccattgaagtgacagat
aatcaagcatccatggagttgatctcgattacgggtaataacaaagatgtggaagcatca
aaaccagagaaattagaggaaaacccaaatgcacccaaaggtcctccacctgtcagcatg
tttatcttcaaacccgacaaccccatccgcagggcctgccactacattgtcaatctccgt
tatttcgagatgtcaattctccttgtgatcaccgccagcagtattgcattggctgccgaa
gaccccgtcaacacaaattcagagaggaacaaagtgctgcgttattttgattatgtcttc
accggcgtcttcacgtttgaaatgataatcaagatgatcgagcagggtttgatcctccat
gacggctcttactttcgtgacctgtggaacattctggacttcatagttgtggtgggagct
ctggttgccttcgctctcacaatgctcgtctgtttctcgtttgtttctctgtcggtcgtc
ttgtggctcacggcatctggcaggaatgtgatggggagtaccacaggacgagacattaaa
accataaagtcactgcgtgtgctcagggttcttcgtcctctgaagaccatcaagcgactt
cccaaactcaaagctgtctttgactgtgtggtcacgtcccttaagaacgtctttaacatc
ctcattgtctacaagcttttcatgttcatctttgccgtcatcgctgtgcagcttttcaaa
gggaaattttactactgcacagacagttccaaggacacagaagaagaatgcaagggctac
tacattgattacgacaaagacaagaaaaacaaggagaaacgagagtggaagagacgcgat
ttccactacgataacattgtctgggccctgttgactctcttcaccgtgtctaccggggag
ggctggccgcaagttttgcaacactctgtagatgtgaccgaggaggaccggggacccatt
caagggaacagaatggagatgtccatcttttatgtcatttatttcgtggtcttccccttc
ttctttgtcaacatattcgtggctctcatcatcattacctttcaagagcaaggtgacaaa
atgatggaagagtgcagtctggagaaaaatgagagggcttgtatcgactttgccatcagt
gccaagcctctgactcggtacatgccgcagaacagacagtcctttcagtaccgcctgtgg
cactttgtggtatcgcccttgtttgagtacaccgtgttgacaatgatcgccctcaacacc
attgtcctcatgatgaagcatcacgagcctcgcactgcaggttatgatgatgtactaaaa
catctcaacactgcgttcacagttattttctctgtggaatgtgttctcaagatcctggcg
tttggttttacgaattatttcagagacacgtggaatatatttgatttcatcacggttcta
ggaagcatcactgaaattgtggttgaccagttctctccaaagtctggtacttttaacatg
agcttcctgaagctgttccgggccgctcggctgattaaacttctgcgtcagggctacacg
atccgtattctgctttggacgtttgtgcaatcttttaaggctcttccgtacgtctgtctg
ctcatcgccatgctgtttttcatatatgccatcattggcatgcaggtgtttggcaatatc
aagctcaatgaaaaaagccaaatcaatcgtcacaataactttaagaccttctttggtgcc
ctcatgctattgttcaggagtgcaacaggtgagtcatggcaggacatcatgttgtcgtgt
ttaggagagaaggagtgtgaaacggacatgtccctcaacaactccacgacaaaagccata
cggaaagaatgtggtacagacttcgcatacttctacttcgtgtctttcatcttcttcagt
tcatttctgatgctaaatctcttcgtggctgtgatcatggataattttgagtacctgaca
cgtgattcgtccattctgggtcctcatcacttggatgagtttgtacggatctggggagaa
tatgaccgcgccgcatgtggtcgtattcattacactgatatgtacgagatgctgacctgc
atgtccccaccgctcggcctgggcaagaaatgcccctccaaagtggcgtataagcggctg
gtgctgatgaacatgccggtggatgaagacatgtcggtccactttacctccactctaatg
gcgctgatacgcaccgcgctggatattaaaatagctcgaggaggggaggacaggggccag
atggacatagagttacagaaagaaatcagcgtcatatggccacacctctcccagaaagcc
cttgatctgcttgtacccatccacaaagccagtgacatgacgattgggaagatctatgca
gccatgatgatcatggactattacaagcagaacaaagctaagaaactccgtcagcagctt
gaggaacagaaacatgcaccgatgttccaacgcatggatgcatcgtcgctcccgcaggac
atcctctgcagcgccaaagctttgccattcctgacccacagtgctggatctgccctcacc
agaggtgggtttttggcactaagtcccatctccccccaagatctcttcatgcagcctgta
gcccaagaaagcatggaggagagagaggagtaccagcatcagtatcacctccagacaatg
gtgccagagcacaaagagtttagagctgtgctgctccccactagcatgcagtctgatcca
ctgcaggtgccagggagaggcgtctctatccgagcctcctccatgccacggctggagata
gagccacagcaggtgtctttggagagcaaactgatgaagcgttcgttctcgacgatcgga
gatcagtgtgtgaacggtgactggcaggaagagttctcgctggagcgcgtgagccccgat
cgactggagagacccagacaaagaagcttcagagctgtcaggtcaaacctgcgggagccg
gtggacaaggagagaggacgatctaaagagaggagacacctgctgtcgccagacgtgtcg
cgctgtaactcagaggaaaggagccagtcacaggacagacaccactcgcgatcacctagc
gagggcaggaaacatatgtcacatagacagggaaacacttcagtcagcccaatcccctcc
acctctgattcagggacgcctcgagggcgccggcaactcccgcaaacgccgtctcgccct
cggcctcacatctcctactctcccttggtttgtcgtgcccaaccagcaccagcagagagc
cattccctgacccggcccgcagaggaaggggaggagcctatcgccgccgtcgtcgcccat
tccaccccgcaccgctacatctcggagccgtacctgccgctgcaggaggacgttaacagt
ctggacctcagtggggtcgaggagactctcacgttcgaggctgccatggcaagcagcctg
ggccgctccaacaccatcagctccgccccacagctacgtcacagttggcaggtgccgaac
ggacatttccgtaaacgattagcacaagccacgtcgggaacatcggggtgtgagcttctt
agtgacactgatgaggatgaccggtgttag
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integrated database retrieval system
