Triplophysa dalaica: 130439994
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Entry
130439994 CDS
T09616
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130439994 (ybx1)
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130439994 (ybx1)
03041 Spliceosome [BR:
tdw03041
]
130439994 (ybx1)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
130439994 (ybx1)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
130439994 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
130439994 (ybx1)
Spliceosome [BR:
tdw03041
]
Common components
Common spliceosomal components
General mRNP proteins
130439994 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
130439994
NCBI-ProteinID:
XP_056628708
LinkDB
All DBs
Position
18:21743173..21747756
Genome browser
AA seq
322 aa
AA seq
DB search
MSSEAETQQQQQPPQPAADAESPSSPTAASSAGDKKVIATKVLGTVKWFNVRNGYGFINR
NDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSK
YAADRNRYRRYPRRRAPPRDYPSDGEGEGQEKREEGDSAPEGDMQQQQQQRRPTFAGRRR
YPPYFVRRRYGRRPPYSNTPQRGDMAEVSDGGEGDENQGGPEPGNKPMRQNYRGFRPSFR
TRGPPRPRPAREGEEEDDKENQGEGGESGEGQEPRQRRYRRNFNYRRRRPQSNKPQDGKD
DKAAEASADKPAAPEAQQGGAD
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacagcagcagcagcagccgccgcagcctgccgccgacgcg
gagagcccgtccagcccgacagccgcatcttcagcgggggataagaaggtcatcgcaaca
aaagtcctggggacagtgaaatggttcaatgtgaggaacggctatggtttcatcaacagg
aatgacacgaaggaagatgtctttgtccaccagacggccattaagaaaaacaacccaagg
aaatatcttcgcagtgttggggatggagagactgtggagtttgatgttgtagagggggag
aagggtgctgaggcagccaatgttactggcccgggtggagtccctgtgcaggggagcaag
tacgcagctgataggaaccgctacaggcggtacccacgcaggagggccccccctcgcgac
tacccgagcgatggagagggggagggtcaggagaagagggaggaaggagacagcgcccct
gagggtgacatgcagcaacagcagcagcagcggagaccaaccttcgccggtagacgccgc
tacccaccatactttgtgcgcaggcgctacggcagacgccccccttacagcaacacgcct
cagagaggagatatggctgaggtgagtgatggcggggaaggtgatgagaaccaaggtggt
ccagaaccgggcaacaaaccaatgaggcagaactacagaggcttccgaccaagtttcaga
acaaggggtcccccacgtccccggcctgcacgagaaggggaggaggaggatgataaggag
aatcaaggcgagggcggagagagcggtgagggccaggagccccgtcagcgccgctaccgc
cgcaacttcaactaccgccgcagacgaccccagagcaacaagcctcaggacggcaaggat
gacaaagcagctgaagcatcagctgacaaaccggccgctcccgaagcccaacagggcgga
gccgattaa
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