Triplophysa dalaica: 130440002
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Entry
130440002 CDS
T09616
Symbol
prdm16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00310
Lysine degradation
tdw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130440002 (prdm16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130440002 (prdm16)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130440002 (prdm16)
Enzymes [BR:
tdw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
130440002 (prdm16)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130440002 (prdm16)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130440002 (prdm16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
zf-H2C2_5
SET
zf-met
Zap1_zf1
C2CH-3rd_BIRD-IDD
zf-BED
DUF7128
C2CH-4th_BIRD-IDD
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
130440002
NCBI-ProteinID:
XP_056628723
LinkDB
All DBs
Position
18:complement(17224789..17434518)
Genome browser
AA seq
1187 aa
AA seq
DB search
MRSKARARKLAKNDSEALDRIYDTEPNLMTGESAEEETEDSIMSPIAVGPMSPHPCNEEF
TPKEGSPYEVPVYIPDDIPIPSDLELRESSVPGAGLGIWAKAKIQMGERFGPYNGLQSTT
VKDTYEWEQMLDDHKESSHDSCIKKVMDNIANVKFCLGGALEFSSCWLKYVRTALSDQKQ
NLAVCHINEDQIYYKAIKEIEIGEELLVYMNEEAFPGGTMAPNLEDEQMYRCEHCDELFT
SKLELRQHQKYSCNSCNSIFDSLSEDFKQEHEDSDEPVHECKDCEKIFPSEYSLGQHMIV
HTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCDKVFTDPSNLQRHIRSQHVG
ARAHTCPECGKTFATSSGLKQHKHIHSSVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQ
IKCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFTPGIPITSSHILGKSKSHHGLNHTG
LGFGDYFPSRPHHAGLPFSPAPSAFPAISHSFQGIFPSSLYTRPPLLPPSPLLKSPHSNC
QEGKLHTLDAPAFSFASSMNNSNGNVGSALTSQSEENRESKLELSIPDNKNKIKINDMSD
GSDLDDVNTSSGTDLDTTTVSGSDLDSEAESEQHKSRRKTVQESKENEVRRSSVSVCSSG
NPFPSTQHSFFQPPQEQALPPSGATTDSIKAIASIAEKYFGSGFIGLQEKKLGSLNYHSM
FPFQFLPNFPHSLYPFTDRALNPGMLFKPDPKSPREHTQKIPTATGADSPFDLTTKPKEV
KPLLPPTVKAGLTCKALLISNEQPLDLSIGTRSRASQNDGTPEHHKNQVYGTNCKAASTN
EHIALTTSQSLHQSQIPQLKAPHPQPTTPHQQTSLHYAKPSPFFMDPIYRVEKRKLIDPV
GALKDKYLRPAPLLFHPQVSAMENMTEKLDSFRTLKLDASSSLQHTSHPLFNFRSPPPSL
SEAILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVR
NIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGIHSNLGINLSSPNSESD
NHALLDEKEDSYFSEIRNFISNSELNQACTSSEKRAEPAEDNSHAASKQDEEEEEMEGDD
EEEDGSLTEKSQDETASLVTMVQGTYEDDEDAASLPMSYEHTRRLMQ
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagagctagaaaactggccaaaaatgacagtgaagctctagaccgc
atatacgacacagaacctaatctcatgactggcgagagtgcggaagaggaaacagaagac
agcatcatgtcccccattgcagttgggcccatgtcccctcatccctgcaatgaggaattt
actcctaaagaaggctcaccctacgaggtgccagtctacattccagatgatattcctatc
ccttctgacctggaactcagagaatcatctgttccaggggctggccttggaatctgggcc
aaagccaaaattcagatgggagaacgctttggaccatacaacggactgcagagcaccacc
gttaaagacacttatgaatgggagcaaatgctggatgatcacaaagaatcttctcatgac
agctgtattaaaaaggtaatggacaacatagccaatgtgaagttctgtttgggtggagcc
ctggagttcagcagttgctggcttaaatatgtacgcacagccctttctgaccaaaagcaa
aacctggctgtgtgtcatataaatgaagatcagatatattataaagctattaaagaaatt
gaaataggggaggagttactggtttacatgaacgaagaagcttttccagggggcacaatg
gcaccaaatttggaagatgaacagatgtaccgctgtgagcactgtgacgagcttttcact
tcaaagctggagttacggcaacatcagaaatattcctgcaatagctgcaactccattttt
gattcgctaagtgaagacttcaaacaggagcatgaggacagcgatgagccggtgcatgag
tgcaaagactgtgaaaagatctttcctagcgagtacagtcttgggcagcatatgattgta
cacaccgaggagagagagtataagtgtgaccagtgtcccaaggccttcaactggaaatcc
aacctcattcgccatcagatgtcacatgacagtggcaagcgctttgagtgtgaaaactgt
gataaggtgttcacagaccctagcaacctccagcgccacatccgttctcagcatgtcggt
gcccgagcccatacctgccctgaatgtggcaagacctttgccacgtcctcgggactcaag
cagcacaagcacatacacagcagtgtcaagcctttcatctgtgaggtgtgtcacaaatca
tatacccagttctctaacctgtgccgtcacaagcggatgcatgcagactgccgcacacag
atcaagtgtaaagactgtgggcaaatgttcagtactacctcctccctcaacaaacatcgg
cgcttttgcgaggggaagaaccattataatcccggaggcatattcacaccgggcatacca
attacctccagtcatatcctaggcaagtccaagtctcatcatggcctgaaccatactgga
cttggctttggtgattacttcccatccaggccccatcatgcagggctgcccttttcccca
gcaccctctgcattcccagctatttctcatagctttcaagggatatttccttcctcactg
tatactagaccgccattgttacctccaagtccacttctaaagagtccacatagtaattgt
caagaaggaaagctacatacacttgatgcccctgctttttcttttgcgtcatcaatgaac
aatagcaatggcaatgtaggaagtgctctcaccagccagtcagaagagaatcgagagtcc
aaactggagttgtcaatcccagacaacaaaaataaaatcaagattaatgacatgtctgac
ggcagtgacctggatgatgttaatacttccagcggcacagatctagacacaaccacagtg
tctggctcagatcttgatagtgaggctgaaagcgaacagcacaagagcagaagaaaaact
gtgcaggagagcaaggagaatgaggttcgcagaagttcagtgtcagtctgcagctcagga
aaccctttcccctccacccagcattcctttttccagccaccacaagagcaagcacttcca
ccttctggtgccaccacagactccattaaagccatcgcctctattgcagaaaagtatttt
ggctcaggctttattggcttgcaggagaagaagttgggctccttaaactaccattccatg
ttcccattccagtttcttcctaacttcccacattcattgtacccatttacagacagagct
ctaaatcctggcatgttattcaaacctgatcctaaatcccctcgtgaacacacacagaaa
atccctacagccactggtgcagattcaccatttgacctaaccaccaaacccaaggaggtc
aaacctcttcttcctcctactgttaaagcaggcttgacatgcaaagcacttctgatctcc
aacgaacaacccctcgacctcagtataggcactcgaagtcgagccagtcagaatgatggc
acacctgaacatcacaagaatcaagtctatggcacaaactgcaaagcagcatctacaaat
gaacacatagcattaactacgtcccagagcttgcaccagtcccaaatccctcagctgaaa
gcaccccaccctcagccgactactccacatcagcagacatcactccactatgccaagcct
tctcctttttttatggaccccatctacagggtggagaagaggaagctaatagacccagta
ggggctctaaaggacaagtacctgaggcctgcaccactacttttccatcctcaggtgtct
gcaatggaaaacatgaccgagaagctagatagttttaggactctgaaactggatgcttcc
agttccctccagcatacttcacaccccctttttaacttccgttccccaccgccctctctc
tctgaggcaatcttgcgcaaaggcaaggagcgatacacctgcaggtactgtgggaaaatc
tttccgaggtcagctaatcttacaaggcacttacgaacacacactggagagcaaccctac
aggtgtaaatactgtgaccgttcattcagcatctcctccaacctacaacgacatgttaga
aacattcataacaaggaaaagcctttcaagtgtcacctctgcaatcgctgcttcggtcaa
cagaccaatctggaccggcatttgaagaaacatgaacatgaaaatattccagtgagtcag
cagtctgggattcactcaaatttaggaataaatctttcctcaccaaactctgagtctgac
aatcatgcccttttagatgaaaaggaggactcatacttttcagaaattagaaatttcatc
tcaaatagtgagctgaaccaagcctgtacctcctcagagaaaagggcagagccagcagag
gacaattctcacgcagcctccaaacaagatgaagaagaagaggagatggagggagatgat
gaagaagaggatggttctttaactgaaaagtcacaagacgagactgcttctctagtcact
atggtgcagggcacttatgaggatgacgaagatgcagcatcactccctatgtcttacgaa
catacgcgcaggcttatgcaatga
DBGET
integrated database retrieval system
