Triplophysa dalaica: 130440013
Help
Entry
130440013 CDS
T09616
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03083
Polycomb repressive complex
tdw04980
Cobalamin transport and metabolism
tdw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130440013 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130440013 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130440013 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tdw01009
]
130440013 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130440013 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
tdw03029
]
130440013 (hcfc1b)
Protein phosphatases and associated proteins [BR:
tdw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130440013 (hcfc1b)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130440013 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
130440013 (hcfc1b)
MLL-HCF complex
130440013 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130440013 (hcfc1b)
Mitochondrial biogenesis [BR:
tdw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130440013 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
130440013
NCBI-ProteinID:
XP_056628745
EnsemblRapid:
ENSTDLG00000004061
LinkDB
All DBs
Position
18:complement(2512358..2530550)
Genome browser
AA seq
2086 aa
AA seq
DB search
MASSGTTVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSSAGG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDAMTW
ETILMDTLEDNIPRARAGHCSVSINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQA
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTATHTPSLPVNSPKS
PVPAAAAPAGQSMPLSGVTLLQQVPSPTTSMPSSPLAASPRGPAILKVAAPHSAAGASVV
TVHQTTPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSNPQMSGMAALAAAAAATQKIPP
SSTTMLNVPAGTTIMKTVAMTPGSTTLPSSVKVASPVMVTNPATRMLKTAAAQVGTSAIT
TPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGSGGTLLSSLGKM
MSVVHTKPVQTSAVSGQAGNSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQAGGT
GTKPTILGISSVSPTTTKPGTTYIKTIPMSAIQQGATGLTSSAGIKSPYTIITTKVGTPG
TPGKYITSMPKLTGAGQHGVTQVVLKGAPGQPGTILRTVPMGGVRLVSPGTVSAGKPTVT
TLVVKGTTGVTTLGTVTGTVSTSGVGGSVASTNATLATPVTTLASVPTLSSQVINPAAIT
VSAAQTSHATTTIQSAAQATKVTLITTPSGAEDQPAQDLPVSILASPTSDQPSNTGADAG
DAAGEGAATVTIICSNPPCETHETGTTNTATTASAKICSNPPCETHVTGTTNTATTASAN
MGGVQQVCTNPPSETHDTGTTNTATTASCNMGSTEMGTVNSKTDSPTAGTSSASEGSSAA
EGSSAAEGTSAAEGGSAAEGGSAAEGGSAAEGGSAAEGGSAAEGGSAGEGRSAGEGRSAG
EGRSAGEGRSAGEGGSAGEGSSASGTKRPENQRTGTTNTATTASCNMGSTEMGTVNSKTE
SSTASTSSASVSEPAGSAGEGTSESGSMRPENHRTGTTNTSTTARSNMGSDQTGTVQSSS
KSQASISSTMLPLSSSPSSETLQTSPANPDPSSAPGDVKKDCSNPPCEAQETGTTSTATQ
STSAMGNVQTNVAQKVCSNPPCETHETSTTNTLTPASSNIAPGQNATVERECSNPPCETH
ETGTTNTATQASSSIGDGQNATVQRVCSNPPCETHETGTTNTPTQASSSIGDGQNATVQR
VCSNPPCETHETGTTNTPTQASSSINPEQNATVQRVCSNPPCETHETGTTSTATTATSSL
ETGDGTAQQGAEEQIDSGTSSEPTSSTEPANPATQSRAITTVTQATPTPGPSVPEISSMA
GSAVVAEVPGESEAMEQTSAEAAASGEEPMQTECQGELGEGAAVRVVAIDEAAVEGTMVQ
VHVAMEAQQGQGGQAEQMEAGVEGAEAMSLAPQDSEALSLPQELMSAEGQQTTLMVTGLT
PEELAVTAAAEAAAQAAATEEAQTLAIQAVLQAAQQAVLSGNSGQEQRTTTIPIVLTQQE
LAALVQQQQQLQAAQAEAAAAALPTEGLAPADSLNDPASESNGHEMATAVTAAVASLLPR
AAAAETLAPSSTFALSQPMVVASPAKIQAATALAEVANGIVSTSAKQAAPPAVVKPPVKK
ENQWFDVGIVKVTNTVVTHYYVPADDSPVTDDDSGAMPDYSRMKKIELSPGTAYKFRVAG
INACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLA
IQSSQTVEAKASAPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEK
GYGPATQVRWLQETSKDGSAAKPAAKRPVSSPDMKGTGIKKARSDQ
NT seq
6261 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcaccacggttctgcagccgcgctggaagagagttttgggctggtcc
ggcccggttccgcgcccgagacacggacaccgagctgtggccattaaagagctgatggtg
gtgttcggcggagggaatgaagggattgtggatgagctgcacgtttataacacagccacc
aatcagtggtttattcctgctgtccgcggtgacattcctcctggctgtgctgcctatggg
tttgtgtgtgatggcacccgacttcttgccttcgggggtatggtcgagtatggaaagtac
agcaatgacctttatgaactacaggccagtcgatgggagtggaaacggttgaaaccaaaa
gcccctaaaaatggaccaccgccttgtccccgtctgggtcacagtttttctctcgttgga
aacaaatgctatttgtttggcgggcttgctaatgacagtgaagatcccaaaaacaatatt
ccaagatacttaaatgacctgtacacactggagcttcgtccgggatcaagcgcaggaggc
tgggacatccctattacatacggcgttctgccgccacctcgtgagagccacactgccgtt
gtttacacagagaaaacgtccaaaaagtctcgtctcatcatctacggtggtatgagtggg
tgccgccttggagacctctggactttagacatagatactttgacctggaacaaacccgct
ataagtggcacagcacctctgccccgcagtctgcactccgccaccactataaccaacaag
atgtttgtatttggtggatgggtccctctggtaatggatgatgtcaaagtggcaactcat
gagaaggaatggaagtgcactaacacattggcatgcttaaatctagatgcaatgacttgg
gaaactatcttgatggacacactagaggataatatcccaagggccagagctggacactgt
tcagtgtccattaacaacaggctgtatgtctggagtggcagggatggctaccgcaaagcc
tggaacaatcaagtttgctgcaaggatctttggtacctggagacagatcgtcctcaggcc
ccgtcgcgggttcagttggtccgtgccaacaccaactctcttgaggtcagttggggggca
gtgcccactgctgacacttacctgctacagctgcagaaatatgacatccctgctgctacg
gctgccacatctccgactgccacccacaccccttctctacccgtaaactcgcccaagagc
ccagttccggctgctgccgcacctgccggtcagagcatgcccctgtctggggtcacactg
ttacaacaagttccttcacccaccacctccatgccaagcagtccgttggcagcctcaccc
cgtggaccagctattcttaaagtggcagcacctcattcagcagctggggcttcagttgtt
acggtgcaccagacaaccccagggggcaaatctccagtcacagttacatcacttcctgcg
ggagtccgcatggttgtccctgcgcagagcacccagggaactccaatcggcagcaaccct
cagatgagcggcatggctgctttggctgcagctgcagctgcaacacagaagatcccgccc
tcttccacaactatgctaaatgttccagctggaacaaccatcatgaaaactgttgctatg
accccgggatccacaactttaccgtcttcggtcaaagtagcttcacctgtaatggttact
aaccctgctaccagaatgctgaaaacggcagcagcacaggtcggcacttcagccatcact
actccaaacaccccaacgcgccccatcatcactgtgcacaaatcaggcacggtgactgtg
gctcagcaggctcaggtcgtcaccacaatggttggcggtgtcaccaaaactataactctt
gttaagagccccatcactatgggtagcggtggcacgctgctctccagccttggaaaaatg
atgtctgtcgttcatacaaaacctgtgcaaacctctgctgtgagtgggcaggctggaaac
agtcccgtcacgctaatacagacaaagactcctctgcctgccggtaccatcctgaagctg
gtgacttccgcagatggcaagcccactaccatcattacaacatcccaggcaggaggaacc
ggaacgaagcccactatactgggcatcagcagtgtctctccaaccaccaccaaacccgga
acaacctatattaaaaccattcccatgtctgccattcaacaaggagctacaggtttgacc
agcagtgctggcatcaaatccccctacacaattatcaccacaaaagtgggcactcctggc
acacctggcaaatacataacctctatgcctaagctgacaggcgctggacaacatggagtc
acgcaggtggtcttgaagggggcaccgggtcagccaggcaccatcctgcgcacagttcct
atgggtggagtgcgtctggtttctccaggcactgtttcagctggtaaacccactgttacg
acactggtggtcaagggcaccacaggtgtcacgactttggggacagtgactggtactgtg
tccaccagtggggttgggggcagtgtggcaagcacaaacgccaccctggcaactcccgtc
accacccttgccagcgttcctactttatccagccaagttatcaatccagcggctatcact
gtatctgctgcacagacaagccacgccaccactacgatacaatctgctgcacaggctact
aaagttactctgatcaccacaccaagtggtgctgaggatcagcccgcacaggatcttcct
gtttctatcctggcatctcccacctccgatcagccctcaaacactggtgctgatgctggt
gatgccgctggcgaaggtgctgctacagttactatcatctgctccaacccaccatgcgag
acccacgagaccggaacgaccaatacggctacaacagcttctgccaagatctgttccaac
cctccctgcgaaacgcacgtcacaggcaccaccaacacagccacgactgcctctgctaac
atgggcggagtgcagcaggtgtgcactaacccaccctcagagacccacgacacgggcacc
accaacacagccacaactgccagctgcaacatgggctccacagagatgggcacggtgaac
agtaagacagattctcctacggcgggtacatcctcagcctctgaaggcagttctgctgcg
gaaggcagttctgctgcggaaggcacttctgctgcggaaggcggttctgctgcggaaggc
ggttctgctgcggaaggcggttctgctgcggaaggcggttctgctgcggaaggcggttct
gctgcggaaggcggttctgctggggaaggccgttctgctggggaaggccgttctgctggg
gaaggccgttctgctggggaaggccgttctgctggggaaggaggttctgctggggaaggc
agttctgcatctggcaccaagcgtccggagaatcaacgcacgggcaccaccaacacagcc
accactgccagctgcaacatgggctctacagagatgggcacggtgaacagcaagacagag
tcttctacggcaagtacatcctcagcctctgtttcagaaccagcagggtctgctggggaa
ggcacatctgaatctggctccatgcgtcctgagaatcaccgcacaggcaccaccaacacc
tccaccactgctcgctccaacatgggctctgatcagacaggaacagttcagagctctagc
aagagccaagcttcaatctcttccacgatgttgcctctctcttctagcccctcttcagag
acgctccagaccagccctgcaaacccagatccctcttctgctccaggagacgtcaaaaaa
gactgctcaaatccaccttgtgaggcacaagaaacgggcacaaccagtactgctacacaa
tcaacctctgcgatgggcaatgtgcaaaccaatgtggcgcagaaggtgtgctctaatcca
ccttgtgaaacccatgagacgagcactaccaacacactcaccccagcctcatctaatatc
gcccctggtcagaatgccactgtggaaagggaatgttccaatccaccctgcgaaacccat
gagacgggcacgaccaacacagccacccaggcctcatcttctattggtgacggacagaat
gccactgtgcaaagggtatgttccaatccaccctgcgaaacccatgagacgggcacgacc
aacacacccacccaggcctcatcttctattggtgatggtcagaatgccaccgttcaaagg
gtatgttccaatccaccctgcgaaacccacgagacaggcactaccaacacgccaacccaa
gcttcatctagtattaatcctgaacaaaatgccactgtgcaaagggtgtgctccaaccca
ccctgtgaaacccacgaaacgggaactacaagtacagccaccacagctaccagcagctta
gaaactggagatggaactgctcagcagggtgctgaagaacaaattgacagtggaacaagc
tcagaacctacgtcctctacagaaccagccaatcccgcaacacaaagcagagccatcacc
acagtgacacaagccacgcccactccaggaccatcagtaccggagatctcatccatggct
ggttctgcagtagtggctgaggttccaggagagtcagaggctatggagcagaccagtgct
gaagctgcggcctctggagaagaacccatgcagacagagtgccagggagaactgggtgag
ggagcagccgtcagggtggttgccatagatgaagctgcggttgagggcaccatggtgcaa
gttcatgttgccatggaagcgcagcaaggccagggaggtcaggctgagcagatggaggct
ggtgttgagggcgcggaagcgatgagtcttgctcctcaggactcagaagccctttctcta
cctcaggagctgatgtctgcagaaggtcagcaaactacactcatggtgaccggactgacc
ccggaagagctggctgtgactgcagccgctgaggcagctgcgcaggcagcagctacagag
gaggcccagaccctcgccatccaagccgtactgcaggcagctcaacaggctgtgctcagt
ggaaattcaggtcaggagcagcggaccaccaccatccctatcgtcctgacacagcaggaa
ctcgcggctctcgttcaacagcagcaacagctgcaggcagcccaagccgaagcggccgca
gctgcgctgcccactgagggtttggctccagcagacagcctcaacgaccctgcatctgag
agcaatggacacgagatggcgactgccgttacggcagctgtggcgagtctcttaccgcgt
gctgctgctgctgaaactctggccccatcgagtactttcgcactatctcagcccatggtg
gttgccagccctgctaagatacaagcggccactgctttagctgaagtggccaatggaatc
gtgtcaacatctgcgaagcaagcagccccccctgcagtggtgaagccacctgtgaagaaa
gagaatcagtggtttgatgttggtatcgttaaggttacgaacacggttgtcactcactat
tacgtgccggcagatgattctcctgttactgatgatgactctggtgccatgccggactac
agccgaatgaagaagatagaactgtcccctggcactgcgtacaagttccgtgtagctggt
atcaatgcgtgtggccgtggaacgttctccgaggtctccgcttttaagacctgcttacct
ggcttccctggagcaccgtgtgccatcaaaatcagcaagagccctgatggtgcccacctg
acctgggagcctccttcagtgacatcagggaagatcatagagtattcagtgtatctggcc
atacagagctcgcagacagtcgaggcgaaagcgtctgctccggcacagcttgcctttatg
cgggtgtactgtggacccagcccatcctgcctggtgcagtcgtctagtctctccaacgcc
cacattgactacaccaccaaaccagcaatcatcttccgcattgccgcccgtaatgagaag
ggctatggtcccgccacgcaagtcaggtggctacaagaaaccagtaaggacggctcagca
gccaaaccagcagcaaagagaccagtgtcttcacctgatatgaaaggcaccggtataaag
aaagccagatctgaccagtga
DBGET
integrated database retrieval system