KEGG   Triplophysa dalaica: 130440110
Entry
130440110         CDS       T09616                                 
Symbol
taf5l
Name
(RefSeq) LOW QUALITY PROTEIN: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tdw  Triplophysa dalaica
Pathway
tdw03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    130440110 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdw03021]
    130440110 (taf5l)
   03036 Chromosome and associated proteins [BR:tdw03036]
    130440110 (taf5l)
Transcription machinery [BR:tdw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     130440110 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     130440110 (taf5l)
Chromosome and associated proteins [BR:tdw03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     130440110 (taf5l)
    STAGA complex
     130440110 (taf5l)
    TFTC complex
     130440110 (taf5l)
    SAGA complex
     130440110 (taf5l)
    SLIK complex
     130440110 (taf5l)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I WDR55 TFIID_NTD2 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_RIG_2nd RMC1_N Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_WDR19_1st PEP5_VPS11_N WD40_RFWD3 PROPPIN Nbas_N Cytochrom_D1 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 130440110
NCBI-ProteinID: XP_056628971
LinkDB
Position
2:4023741..4027987
AA seq 597 aa
MKRGRTEQIQNVVTQYLKRRQYIDTDGCLKGAKLSQSAEEMAASLTVQTETSCANVVSAA
PCQSDPHQYESQFSRLRSFLQDAAAPWTKEVSGVLFPLFLYLHLDMARCGLKGSVDSFYX
TFHSFFQQDPEQKAIVDLLKGVVSLQDVTSNPKLCSLRDHKYVVHMTDQAYNYLLRYLQS
DDNSAICWVLSAHVQVEVTAVRRTDYQLYGTGLGVGNTTSSSTAVDGTEGTEPVEVTAGL
PQNEAALDALQDCIKHVREGPPSLTTVCFYAFQHTDQLLNTAEVSADSRLLAAGFDNSSV
KLWSLRARKLKAGPHKADVSKIRLACDLLEEEADDEEASGSEIKTLRAHSGPVYSTAFLT
DGSGLVSCSEDSTVRFWDLNSFTNTVLYRGHAYSIWDVDVSPCSLYFATASHDRTTRLWS
FARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTQQGASVRLFTGHRGPVL
SLAFSPDGKYLASAGEDQRLKLWDLASGTLFKDLRGHTDSINSLSFSPDSSLVASGSMDN
SVRVWDIRNTHGTAPSDGSSSELIGQYTGNTSNILNVQFMACNLLLVTGTALEKQEQ
NT seq 1794 nt   +upstreamnt  +downstreamnt
atgaagcggggccggacagaacagatccagaatgtcgtgacccagtacctgaaaaggaga
cagtacatagacacagacgggtgtctgaagggagccaaactctcccagtctgctgaagag
atggctgctagtctgactgttcagacagagaccagttgtgcaaacgtggtgtccgcagcc
ccctgtcaatcagacccccatcaatacgagtcccagttctccagactgcgctcctttctg
caagatgcagcggcaccatggacgaaagaggtgagtggcgtattgtttcctctcttcctc
tacctgcacttggacatggcacgctgtggtctgaaggggtcggtagactcgttctacngg
acgtttcattcgttcttccaacaagaccctgagcagaaagctatcgtggatcttctgaaa
ggagttgtttcgctgcaggacgtgacctccaaccccaagctgtgttctctccgggatcac
aagtatgtggttcacatgaccgatcaagcctacaactacctgctgcgataccttcaaagc
gatgacaacagcgccatctgctgggtgctcagcgcacacgtacaggtggaggtaacggca
gtacgacgaacggactaccagctgtacgggacggggctcggagtgggaaacacgacctcc
tcctccaccgcagtggatgggacggagggcacggagcctgtagaggtcacagctgggtta
cctcagaacgaggcggcgttggatgcgttgcaggattgcataaagcatgtgcgagagggt
ccgccctcgctcaccaccgtttgcttttacgcgttccagcacactgaccagctgctcaac
actgcagaggtgtcggcagacagccgccttctcgccgcagggttcgataactcgtcagtg
aagctctggagcttacgggcgcgtaagctgaaggcggggcctcacaaggcagatgtgtct
aagatcagactcgcctgcgacctgctggaggaagaggcagatgatgaggaggcctcaggc
agcgagattaagaccctgcgtgctcacagcggccccgtgtacagcacggcgttcctgacg
gacggctccggcctcgtgtcctgttcggaggactccaccgtgcgcttctgggatctcaac
agcttcaccaacacagtcctctaccgtgggcacgcctactccatctgggacgtggatgtc
agtccctgcagcctgtacttcgccacggcgtctcatgaccgcaccacccgcctctggagc
ttcgcacgcacgtacccgctccgcctctacgccgggcacctctccgacgtcgattgcgtg
aaattccaccccaattccaactacattgcgacgggttccaccgacaaaaccgtgcgcctg
tggagcacgcagcagggggcgtccgtcaggttgttcacggggcaccggggacccgtgctg
tcgctcgccttctcccccgatggaaagtatttagcgtctgccggtgaggatcagagactg
aagctatgggacctcgcgtccgggaccctgttcaaagacctccggggtcacacagacagc
atcaacagcctttcctttagtcccgacagtagtctggttgcatcagggtccatggataac
tctgtgcgggtgtgggacatacgaaacacacatggcaccgccccgtctgacggctccagc
agcgagctgattggacaatacacagggaacactagtaatatactcaacgtgcagttcatg
gcatgtaatctgctgcttgtgacgggcacagcgctggagaaacaagagcagtag

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