KEGG   Triplophysa dalaica: 130440138
Entry
130440138         CDS       T09616                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
tdw  Triplophysa dalaica
Pathway
tdw03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    130440138 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130440138 (polb)
Enzymes [BR:tdw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     130440138 (polb)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     130440138 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     130440138 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 HHH_5 HHH_2 NTP_transf_2 Cdd1 DUF4806
Other DBs
NCBI-GeneID: 130440138
NCBI-ProteinID: XP_056629035
LinkDB
Position
18:1016317..1020642
AA seq 336 aa
MSKRKAPQETLNEGITDFLIELANFERNVNRAVHKYNAYRKAAAVIAKYPEKIKSGTEAK
KLDGVGAKIAEKIDEFLKTGTLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFYDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMQEMETLILKELELVDPEYIGTICGS
YRRGAESSGDIDILLTHPNFTAQSEKQPKLLNAVVEHLESVSFITDTLSKGDTKFMGVCQ
LQKENEDDEDNIHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTRALEKGFTLNEYTIR
PLGVTGMAGEPLLVDSEKDIFDYIQWKYREPKERSE
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagtaaaagaaaagcccctcaggaaactctgaatgaaggaattacagacttccttata
gagttggccaattttgagagaaacgtcaacagagccgttcataaatacaatgcttacaga
aaagcagcagctgttatcgccaaatatcccgagaagatcaaaagcggaacagaagcaaag
aaactggatggagttggtgcaaagatagccgagaaaatcgatgagtttttgaagacagga
acactacgcaaactggaaaagattcgcaatgatgacacaagttcctccattaacttctta
accagagtgactggaatcggtcctgccgcagcaagaaagttttatgatgagggggtcaaa
acgttagaagatttgaagaagatcgaacacaagctaaatcaccatcaacagattggatta
aagtattttgaagaatttgagaagagaattcctcgtgcagaaatgcaagagatggagact
ctgatactgaaggagcttgagttggtggatccagaatacatcggcactatctgtggaagc
tacagaagaggagcggagtccagtggtgatattgatatactgctgactcacccaaacttc
accgctcaatctgagaaacagccaaaacttcttaacgctgttgtggaacatctggagtcc
gtcagcttcatcactgacacgctgtctaaaggagacaccaagtttatgggtgtttgtcag
cttcagaaagaaaatgaggatgatgaagataacattcatcgacgcattgacatcaggctc
attccaaaggatcagtattactgtggtgtgttgtacttcactggcagtgacatattcaac
aagaacatgaggactcgtgctttggaaaagggctttacgctcaatgagtacaccatccgt
ccactaggggttactggtatggctggagagcccttactggtggacagtgagaaggacatc
tttgattacatccagtggaaatacagagaaccaaaggaacgtagcgagtga

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