Triplophysa dalaica: 130440213
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Entry
130440213 CDS
T09616
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130440213 (sorcs3a)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Others
Others
130440213 (sorcs3a)
Endosome - Lysosome transport
130440213 (sorcs3a)
Endosome - Golgi transport
130440213 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130440213
NCBI-ProteinID:
XP_056629171
LinkDB
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Position
2:5694402..5876306
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AA seq
1246 aa
AA seq
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METCPGIFPGSHFTLFTWLILSSLYLFPNVEAEITCAPCISPMQLGDAGNLYLRNPSDTG
KYSRQDQKKPKVHTVLYPNGVPSGRAAGDFPGLVEKLEKNANAAGLDSRALTENLTESGL
DEEMFSDEYLESESEFEPGEKQNDAARMRIKRSVPEFMESARSGEARSEEQRKSPGLRMD
GPAKRTEVRSNRDGDGKVSDSRPDEPRVVSSTFALAGDSAHNHAVVYWSGKNSSVILILT
KLFDFHLGSVTESTLWRSTDYGSTYERMNDKVGVKTVLSYLYVCPTNKRKIMVLTDPEFE
SSILISSDEGASFQKYRLSFYVLSLLFHPTQEDWALAYSHDQKLYSSFDFGRKWQLVHER
VTPNRFYWSVIGLDKELDLVHMEAHTSEGNCQYVTCRAHACSESSRTYPFPGYIETNSLV
VQDEYIFLQVTTTGRASYYVSYQREPFIRIKIPKYSLPKDMHIVSTDQSQVFTAVQEWNQ
NDTYNLYISDLRGTYFTLALENVRTSRSLGGNSMIDLYEVEGIEGMLIANKKVENQVKTY
ITYNKGRNWRLLQAPATDLAGNPIHCVLPFCSLHLQLQMSENPYLSGTISTKSSVPGVIV
ATGNIGSELSYNNVAMFISSDAGNTWRQIFEEEHNVWFLDKGGALVAVKQPTVPTRHLWM
SFDEGRQWTRHSFSAMPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSVFTRR
CTEGDYQTWHLHNQGEPCIMGQKQIYMKRSPGNYCMLGWDNSRILSAEPCICRAHDFECD
YGFERRGDGNCLPAFWFNPSTVSRSCSQGQNYLNSTGYRKVVANNCTKGVKELYTARKQQ
CLNRPPRGLALATRDDKLSANLGSNVTFLVRLEEGDSMRTNIQLDFGDGTAVSYSNLSWT
QEGIRHVYRSAGIFRVTALAENSLGFDTSSLYLHVTCPVEQIQLLAPYVVIKNKEVNLTA
VVWPSHFRTLTYFWWLGNNTEPIITLDSSISYTFSTEGMTTVTVQVSSGESLLQDSRSIA
VQEFFKSLLLSFSPNLDEANPDIPEWRQDVGRVIKKAVLQVATDIPEDQLLVAVFPGIPT
AAELFLLPPRNQSDGRKRSEEDLEQLSQVLVNALNQISVEFELKPGSRVIVYITQLTLAP
LVDSLPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMISTVGQN
DTTPKITLSEFSTQKEMMEKEMEARVKRAVINTCESTREIPNCTSV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggagacctgtccgggtatattccctggctcacactttactctttttacctggctaatt
ctatcatctttgtacctttttccaaatgtagaggcagagataacttgcgcaccgtgtata
tcgccaatgcaactgggtgacgcggggaatctttatctacgaaacccatctgatactggg
aaatattcgagacaggatcaaaagaaacccaaggttcacacagttctgtatccgaatgga
gtacccagtggacgagcggcaggtgattttcctgggttggtggagaaactggaaaaaaac
gcgaacgcagcgggtttggactcccgtgcgcttacggagaacttaaccgagtccggtttg
gatgaagaaatgttttcggacgaatatttggaaagtgaatccgaattcgaaccaggggaa
aagcaaaatgacgccgcgcgtatgagaattaaaagaagcgtgcccgaattcatggagagc
gcacggagcggcgaggcgcgctcggaagagcaaagaaaaagccctggtctgcggatggat
ggacctgctaaacgcaccgaagttcgctcgaacagggatggtgatggcaaagtatcggat
tccagaccagacgaacccagagtggtcagcagcacttttgctctggctggagactctgcg
cacaaccacgcagtcgtgtattggtccggaaaaaacagcagcgtgattctgattctcacc
aaactgttcgactttcacctcggcagtgtaacggaaagcactctatggagatcaacagat
tatgggagcacctatgagagaatgaacgataaagtgggagtcaaaaccgttctgagttac
ctctacgtctgccctaccaacaaaagaaagataatggtgctgaccgacccagagtttgaa
agcagcattctcatcagttcagatgaaggtgcaagcttccagaaatatcgcttgagcttt
tatgtcctgagtctgctgttccatcccacacaggaggactgggcactggcctacagtcat
gaccagaagctctatagctcgtttgactttggtcgaaagtggcaacttgttcacgagcga
gtgactcccaaccgtttctactggtcagtaataggactggacaaagaattagatctggtg
cacatggaggcccatacgtctgaaggcaattgtcagtatgtgacatgcagagctcacgcc
tgctctgaatccagcaggacgtatccatttcccggatatattgagactaactcactcgtg
gttcaagatgaatacatattcttgcaggtgacgaccacaggcagggcgagttactatgtg
tcctatcaaagagaacctttcatacgcattaaaattcctaagtattctttgcccaaggac
atgcatatcgtaagtacggatcagagtcaggtctttaccgctgtccaggagtggaatcag
aatgacacgtacaacctctacatatccgacttgcgggggacgtacttcactttggccttg
gagaacgtcaggaccagccgcagcctcgggggcaacagcatgatcgacctttatgaggta
gagggaattgagggtatgctcatcgctaataagaaggtggagaaccaggtgaagacgtac
atcacttacaacaagggccgcaactggaggcttttgcaggcgcccgccactgatctggct
ggaaatccaattcattgtgttttgcccttttgttcgctccatctacaactgcagatgtca
gaaaacccgtacctctccggcaccatatccactaagagctcagtgccgggagtcattgtg
gcaacaggaaatattggctcggaactgtcatacaacaatgtagcgatgttcatttcgtca
gatgccggcaacacctggagacagatttttgaggaagaacacaacgtgtggtttttggac
aaaggtggagcattggttgcagtaaaacaacccactgttcctacccgacatctttggatg
agctttgatgaaggtcgccagtggacgcgtcacagtttctcagccatgccgctctttgtg
gatggagttctggtggaggcaggtgcagaaaaccaaatcatgacgtttttcggccatttc
agccatcgctccgaatggcagcttatcaaaatcgactacaagtctgtgtttacaagaagg
tgcacggagggcgactaccaaacgtggcaccttcataaccaaggcgagccgtgcattatg
ggtcagaagcagatctacatgaaacgtagcccgggcaactactgtatgttgggatgggac
aactcgaggatcttgtcggcagaaccctgcatctgcagagcgcatgactttgagtgtgat
tacggttttgagagaagaggtgatggaaactgtctgccagcattttggttcaacccttct
actgtatctcgaagttgcagccaggggcaaaactacctcaacagcactgggtatcgtaaa
gtggttgcgaacaactgcacaaaaggcgtgaaggagttatacacggccagaaagcagcag
tgcctgaatcgaccgccacgaggattagccctggcaacccgtgacgacaaactatcagcc
aacttgggcagcaatgtgaccttcctggtgcggctggaggagggcgactccatgaggaca
aacattcagctggacttcggggacgggactgcggtgtcctactcgaacctgagctggacg
caggagggaatcagacatgtgtaccgcagcgcgggcatctttagagtgacggcgctggcg
gagaacagcctcgggttcgacacgtcatctctgtacctgcacgtgacatgcccagtggag
cagattcagctgttggctccatatgtggtcattaagaacaaggaggtgaacctgacagca
gtggtctggccctctcatttcagaacgctcacctatttttggtggctggggaacaacacg
gagccgatcattacgttggacagtagcatttcctacacgttcagcactgagggtatgacc
acagttacagtgcaggtgtcatcgggagagtccttactacaagatagcaggagcatcgca
gtgcaagaattcttcaaatcgcttcttttatctttctctcctaatctggacgaggccaac
cccgacatccctgaatggagacaggatgtaggtcgggtaattaagaaggccgttctccaa
gtggcgacagacattcccgaagaccagctgctggtcgccgtgtttcccggaattccaacc
gccgccgagctcttcctgcttcctcccaggaaccaatcagatggcaggaaaagaagcgag
gaggatttggagcagttatcacaagtcctggtcaatgcattgaatcagatctcggtggag
tttgaattgaagcccggctctcgggtcatcgtttacatcacacaactaactttagctcct
ctcgttgactccctcccgagacacagcagttctgcaatgctgatgctcctgtctgtcgtc
ttcttgggtttagctgtatttctcatctacaaatttaaaagaaaaatcccctggattaac
atctacgcggaggtgaaccacgagaaagagcaggagatgatcagtacggtgggccaaaat
gatacaacgcccaaaatcaccctgagcgagttctccacccagaaagagatgatggagaaa
gagatggaggcacgcgttaaacgagccgtgatcaacacctgtgaaagcacaagggagatt
ccgaactgcaccagcgtctga
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