Triplophysa dalaica: 130440291
Help
Entry
130440291 CDS
T09616
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130440291 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130440291 (exosc1)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130440291 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
130440291 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
PCB_OB
Motif
Other DBs
NCBI-GeneID:
130440291
NCBI-ProteinID:
XP_056629308
LinkDB
All DBs
Position
2:3659230..3663064
Genome browser
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGCIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctttgcagcacggaggactgtatt
ccgggtaccggcacatatctgaggcacggctgcatcttcgcatcactcgcgggttacgtg
ttgaggaagaacgagggagaagagctcccagtgatttcagtggttagagagacagaagca
cagcttttgcctgacgtcggtgccattgtcacctgcaaggtgacaagtatcaacccaaga
tttgctaaagtccacattttatatgtggggtcgacaccgctaaaagaccgctttagaggc
acgatcagacgagaagatgtgagagcgacagagaaggataaagtggagacatacaaaagc
ttcaggccaggagacatcgtccttgctaaagttatctctttaggtgatgtgcagtcgaac
tacctgctgactacagcggagaatgagcttggtgttgtggtggcccacagtgaagctggc
gctcagatggtccccatcagctggtgtgagatgcagtgtccacgcacgcacgctaaagag
tttcgcaaggtagcgcgggtacagccggagtacctgcaggcatga
DBGET
integrated database retrieval system