KEGG   Triplophysa dalaica: 130440291
Entry
130440291         CDS       T09616                                 
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
tdw  Triplophysa dalaica
Pathway
tdw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130440291 (exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdw03019]
    130440291 (exosc1)
Messenger RNA biogenesis [BR:tdw03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     130440291 (exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     130440291 (exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1 PCB_OB
Other DBs
NCBI-GeneID: 130440291
NCBI-ProteinID: XP_056629308
LinkDB
Position
2:3659230..3663064
AA seq 194 aa
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGCIFASLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctttgcagcacggaggactgtatt
ccgggtaccggcacatatctgaggcacggctgcatcttcgcatcactcgcgggttacgtg
ttgaggaagaacgagggagaagagctcccagtgatttcagtggttagagagacagaagca
cagcttttgcctgacgtcggtgccattgtcacctgcaaggtgacaagtatcaacccaaga
tttgctaaagtccacattttatatgtggggtcgacaccgctaaaagaccgctttagaggc
acgatcagacgagaagatgtgagagcgacagagaaggataaagtggagacatacaaaagc
ttcaggccaggagacatcgtccttgctaaagttatctctttaggtgatgtgcagtcgaac
tacctgctgactacagcggagaatgagcttggtgttgtggtggcccacagtgaagctggc
gctcagatggtccccatcagctggtgtgagatgcagtgtccacgcacgcacgctaaagag
tttcgcaaggtagcgcgggtacagccggagtacctgcaggcatga

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