Triplophysa dalaica: 130440339
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Entry
130440339 CDS
T09616
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130440339 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130440339 (mbd4)
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130440339 (mbd4)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
130440339 (mbd4)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130440339 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
130440339
NCBI-ProteinID:
XP_056629384
LinkDB
All DBs
Position
18:complement(19938233..19943245)
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AA seq
376 aa
AA seq
DB search
MSTAEGADAELRTCSRPQTAALPAEDVTAGWRREMRLNDRVDVYISSPEGRCLRSKTRLH
NNLLSEKDINLQFSDFNFTASSTHSRVTPAEQNGQQKKKGKKKGKAKVMDNSLLIPGIIR
LEEMDCQEEVGERIELEAKDSDQIGDKHIVTLAVRPQSTSKCQEQSMLENTLEKQTLREF
KEENETSSNHVEHMSPSRNTESRSKVLAEKRTTSPYFSGRNDDLSPPKRKAFRKWTPPRS
PYRLVQETLFHDPWKLLVATIFLNRTSGKMAIPTLWQFFERYPNAEVTRVSDWRPLADLL
QPLGLSNLRAKALVRFSDEYLSKSWRYPIELHGIGKYGNDSYRIFCVEEWREVTPKDHKL
NDYHTWLLENQERLGI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagctgaaggcgcggacgcagagctgcgtacatgcagtcggccgcagacggct
gcattacctgcagaggatgttactgcaggctggaggagagagatgagactgaacgacaga
gtcgatgtgtacattagcagtcctgagggcaggtgcctcagatccaagactcggcttcat
aataatctgctctcagaaaaagacatcaaccttcagtttagtgacttcaacttcacagca
tccagtacccacagcagagtgactccagctgaacaaaacggccaacagaaaaagaaagga
aaaaagaaaggaaaagccaaggttatggacaattctcttcttattcctgggataataaga
cttgaagaaatggattgtcaggaagaggttggtgaacgaattgagctggaagcaaaggat
tctgatcaaatcggagacaaacatatagtgacacttgctgtaagaccacagtctacttca
aagtgtcaagaacaaagtatgttagagaatacactggaaaaacagactttaagagaattt
aaagaagaaaatgagacaagctcaaaccatgtggaacatatgtcaccttctagaaacaca
gaaagccgttcaaaggtattggcagagaaacgaacaactagcccatactttagtggaagg
aatgatgatttgagtcccccaaagcgtaaggccttcaggaaatggaccccacctcgctca
ccttaccgtcttgttcaagaaacactgtttcatgatccctggaagcttctagtggccaca
atatttctcaacagaaccagtgggaagatggctattcccacgttgtggcagttttttgag
cggtatccaaatgcagaagtgactcgagtgagtgactggagaccacttgctgacctgctg
cagcctctggggctcagtaacctccgtgcaaaggcactcgtacgcttttccgatgaatat
ctgagtaaatcttggcggtatcctattgagttacatggcattggaaaatatggcaacgac
tcgtatcgtatcttctgtgtggaggagtggagagaggtcaccccaaaggaccataaactc
aacgactatcacacatggctgttggaaaaccaggagagattaggaatttga
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