Taylorella equigenitalis ATCC 35865: KUI_1270
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Entry
KUI_1270 CDS
T02186
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tea
Taylorella equigenitalis ATCC 35865
Pathway
tea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KUI_1270 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tea03019
]
KUI_1270 (rhlE)
Enzymes [BR:
tea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KUI_1270 (rhlE)
Messenger RNA biogenesis [BR:
tea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KUI_1270 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFN36324
LinkDB
All DBs
Position
complement(1373783..1375111)
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AA seq
442 aa
AA seq
DB search
MDKKNFKDFGFHSKILENISKTGYEYATPIQALSFEPILEGRDIMGAAQTGTGKTAAFTL
PILNRLIPKANYSTSPAKHPVRMLVLTPTRELAEQISKNVNLYSDGLPLKCSLIYGGVDI
NSQKQELMRGADIVIATPGRLLDHIEQRTVNLTQVEFLVLDEADRMLDMGFMPDLLRILS
NLPKSRQSLLYSATFSENIRSLAQKFLNNPVEITVASNNSTASTIKQEVYSVSESDKNAA
LVYILTSRAFNNVIIFSNRKVTCKNLERLLNNYDLAVQSLHGDKSQLERTKALDLFKSSK
CNILVATDVAARGLDISDVDAVINYELPPTSEDYVHRIGRTGRAGKKGIAISLCSSEEGK
SLSEIETLTGLKFQKLSLSIPDVFKNGVSHNMKTSLASIKAEYSKNKFFYQPYEDEESDI
EIVKERQTKISNKNIPVLLRRK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaaaattttaaagactttggctttcattccaaaatattggagaatatttct
aaaacaggttacgaatatgcgacccccattcaggctctgtcatttgagccgattcttgaa
gggcgtgatattatgggggctgctcaaacaggtacagggaaaacagcggcttttacattg
ccaatattaaatagattaatacctaaagcaaactatagtacgtcacctgcaaagcatcca
gttaggatgttagtcttaacgcccacaagagaattagcggaacaaatttcaaaaaatgtg
aacttgtactcagatggattacctctgaaatgttctcttatatatggaggcgtagatatc
aattcacaaaagcaggaactcatgagaggtgctgatatcgtcatagcaacgcctggacgg
ctattggaccatattgagcagcgaactgttaatttaacgcaagtcgaatttcttgttttg
gatgaagccgatagaatgcttgatatgggttttatgcccgacctgcttagaattttatct
aacctaccaaaatcaagacaaagccttttatactccgctacctttagcgagaatattcgc
tcattagctcagaaatttttaaataatccagtagagattactgtagcttctaataattca
actgcctcaacaattaaacaagaagtatatagtgtaagtgaatcagataaaaacgctgca
cttgtttatatcttaacttctcgtgcttttaataatgtgattattttttctaatcgtaaa
gtaacctgtaagaatctagagcgtcttttaaataattatgatctagctgttcagtctttg
cacggagataaatcgcaattagaaaggacaaaagctttggatttatttaaaagctcaaaa
tgtaatatcttagtagctaccgatgtagctgcacgtggtttagacataagtgatgtggat
gctgtaattaattatgaattgcctccaacgtcagaagattatgttcacagaatagggcgt
actggaagggctgggaaaaagggcattgccatatcattatgttcttcagaagagggtaag
agtttgagtgaaattgagaccttgactggattgaaatttcaaaaattaagtttaagcata
cctgatgtttttaaaaatggtgtgagccacaatatgaagacaagtttggcatctattaag
gcagaatattctaaaaataaattcttctatcaaccctatgaagatgaggaatcagatata
gaaatagtgaaggagcgtcaaactaaaatctcaaataagaatattccagttttactaaga
aggaagtag
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