Taylorella equigenitalis ATCC 35865: KUI_1589
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Entry
KUI_1589 CDS
T02186
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tea
Taylorella equigenitalis ATCC 35865
Pathway
tea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KUI_1589 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tea03021
]
KUI_1589 (rpoB)
03400 DNA repair and recombination proteins [BR:
tea03400
]
KUI_1589 (rpoB)
Enzymes [BR:
tea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KUI_1589 (rpoB)
Transcription machinery [BR:
tea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KUI_1589 (rpoB)
DNA repair and recombination proteins [BR:
tea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KUI_1589 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
AFN36631
UniProt:
A0ABM5NCF8
LinkDB
All DBs
Position
complement(1713855..1717967)
Genome browser
AA seq
1370 aa
AA seq
DB search
MPYSFTEKKRIRKNFAKRQVVQDVPYLLETQIQSYRSFLQKDLTPSKRADIGLQAAFNSI
FPIESNNGSARLEFVSYVLKEPQFDVKECQLRGLTYYSGLYAKVRLEILDREASKPTVKE
VKEEEVYMGDLPLMTDNGSFIINGTERVIVSQLHRSPGVFFEHDKGKNHSSNKLLFSARV
IPYRGSWLDFEFDHKDYLYFRIDRRRKMPVTILLKAIGMSSDEILGTFFEFSKYDLNDDG
AVLHFVPERLKGEVARFDIVDKKGNVIVQKDKRINSKNIRDIAAAKLTKLPVPDDYLVGQ
TIAKTIIDEETGEVLVQANTEITESVLAQLRKSSIKEIETLYTNELDHGAYISATLAIDE
TLDQTAARKSIYKMMRPGELPADDAVESLFNRMFYNSDTYDLSTVGRMKVNRRLGRNSDK
GPTTLTNEDILDTIKTLVDLRNGRGEIDDIDHLGNRRVRCVGELAENQFRSGLVRVERAV
KEHLGHAESENLLPNDLINSKPISSAIKEFFSSNQLSQFMDQTNPLSEITHKRRVSALGQ
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSMALYARQNEYGFLETPYRKVE
NGKVVDQIDYLSAIEESKYVIAQANANLDEHGNFIDDLIACRQAGETMLMSPEKVEYIDV
APSQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPQKPLVGTGIERTVAVDSGTT
VQARRGGEVDYVDSERIVIRVNDDESVSGSVGVDIYNLNKYTRSNQNTNINQRPIVKKGD
VVQRGDVIADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISEKVIANDRYTSVHIEE
LSVVARETQLGDEEITRDIPNLAAEQLNRLDESGIVHIGAEVRARDVLVGKVTPKGETQQ
SPETKLLREIFQDKALDVKDTSLRVPSGMVGTVIDVQVLTGKRVERDKRAQSIIEEELRR
YRQDLDSQLRIVEKDMFNRLRKVLVGKKVNGGPISLSKGSSITEEYLKNLPTWDWFDIRP
VDEDVAIVLEQAKDSIEKKRHEFDIKFEEKQKKLTQGDELPPGVRKMVKVFLAVKRRLQP
GDKMAGRHGNKGVVSRILPVEDMPHMADGTPADIVLNPLGVPSRMNVGQVLEVHLGWAAK
GIGQRIADMLADERKIQASEIRKYLEKVYNRTGKTEDLKEFTDEQIIEMAHNLKDGIPFA
TPVFDGATEEEINDMLELAYPDDIKEKLHLTDSRTQAYLIDGRTGEPFERPVTIGYMHYL
KLHHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAFTLQEMLTE
KSDDMEGRNNVNRNIIQGDHVIDAGMPESFNVIVKEIRSLGLDMELEGKQ
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgccttactcgtttactgaaaagaaacgtatccgcaaaaattttgcgaaacgtcaagtt
gttcaagacgttccataccttttagaaacacaaattcaatcatatcgcagctttttacag
aaagaccttacaccttcaaaaagagctgacataggtcttcaagctgcttttaattcaatt
ttccctatcgagagtaataatggctctgcgagacttgagttcgtcagttatgtacttaag
gagcctcagtttgatgttaaagagtgtcagcttcgtgggcttacatactattctggactt
tatgcgaaagtacgccttgaaattcttgatagagaagcaagcaaaccaactgtcaaagaa
gtaaaagaagaagaagtctatatgggggatttgcctctaatgactgacaatggttcgttt
attattaacggtactgaacgtgtaatcgtgtcacagttgcacagatcgcctggtgtattt
tttgagcatgataaaggtaaaaaccatagctcaaacaaattacttttttcagcacgtgtt
atcccttaccgtggatcatggcttgattttgagtttgatcacaaagattacttgtacttc
cgtatcgaccgtcgtcgtaagatgccagtaactatcctacttaaagccataggaatgagc
agtgacgaaattttggggactttctttgagttttcaaaatatgatcttaatgatgatggt
gccgtattacattttgttcctgagcgacttaaaggtgaagttgctcgctttgatattgta
gataaaaagggcaatgtaatcgtacaaaaagacaaacgtattaactctaaaaatatacgt
gatatcgctgcggctaaattaacaaaattgcctgtacctgatgattatttggtgggacaa
accattgccaaaacaattatcgatgaagaaacaggtgaggttttagttcaagctaatact
gaaattactgagtctgttttagctcaattgcgcaagtcttcaattaaagagattgagacg
ctttacacaaatgagcttgatcatggtgcttatatatctgctacactagccattgatgag
actcttgaccaaacggctgctcgtaaatctatttataagatgatgcgtccaggcgaattg
cctgctgatgacgccgttgagtcattgtttaaccgtatgttctacaactcagatacatat
gatttatctactgtgggacgtatgaaagttaatcgtaggttgggacgcaattctgacaaa
ggtcctactactttaactaatgaagatattttagacacaatcaaaacacttgttgatttg
cgtaatggtcgcggtgaaatcgatgatattgaccatttaggaaatcgtcgtgttcgttgt
gttggtgagcttgcagaaaaccaatttagatcaggtcttgttcgtgtggaacgggctgtt
aaagagcatctcgggcatgcagagtctgagaatttattgccaaatgatttaataaattca
aaacctatttcatctgcgatcaaagagtttttcagttctaaccagctttctcagttcatg
gatcaaactaatccattatctgaaattacacacaaacgtcgtgtatctgcgttaggacaa
ggcgggctaactcgtgaacgtgcaggctttgaagttcgtgacgtgcatccaactcactat
ggtcgcgtatgcccgattgagactccagaaggtccaaatattggtcttattaactcgatg
gctctttatgctcgtcaaaatgagtacggatttcttgagacaccataccgcaaagtggaa
aacggtaaggttgtagatcaaatcgattatctatcagcgattgaagagagtaagtatgtt
attgctcaagcaaacgcaaacttagatgaacatggaaattttattgatgatttaattgcg
tgtcgtcaagctggtgaaactatgcttatgtcaccagagaaagtagaatatattgacgtt
gcaccatctcaaattgtttcggttgcagcttcactaattcctttccttgagcatgatgat
gcgaaccgtgcacttatgggtgcaaacatgcaacgtcaagcagttccgtgcctacgccct
caaaaaccacttgtgggtacaggtatcgagcgtacggtagccgttgactctggaactact
gttcaagcacgtcgtggcggtgaagttgactatgtcgactcagaaagaattgttattcgc
gtaaatgatgatgaaagcgtgtctggaagcgttggtgtagatatttataatttaaataaa
tacactcgctcaaatcaaaatacaaacatcaatcaacgaccaatcgttaaaaagggtgat
gttgtacaacgtggagatgtgattgctgatggtgcttcaactgacttaggagagcttgct
cttggtcagaatatgcttatagctttcatgccatggaatggatataactttgaggattca
atcctaatttctgaaaaagttattgcaaatgatcgttacacttctgtccatatcgaagaa
ctgtcagtagtagctcgtgaaacacagttgggtgatgaggaaataacacgcgatattcca
aatcttgctgcagaacaattaaacaggcttgatgaatctggaatcgtacatattggtgct
gaagttagagctcgcgatgtgctagtaggaaaggttactcctaaaggtgaaactcaacaa
agtcctgaaactaagctattaagagaaatcttccaagataaggcactagatgtaaaagac
acttctttacgtgtaccatctggtatggttggtacagtcatcgatgtacaggtattaact
ggtaaaagagttgaacgcgataaacgtgcacaatctattatagaagaggaattgcgtcgc
tatcgtcaagaccttgattctcaactacgcattgttgagaaggatatgtttaatcgtcta
cgtaaagtcttggtaggtaaaaaggtaaatggtggtccaatttcactatctaagggatct
agtattactgaggaatatttgaaaaacctaccaacttgggattggtttgatattcgtcct
gtggatgaagatgttgccatcgtacttgaacaagctaaggattcaatcgagaagaaacgt
catgagtttgatatcaaatttgaagagaaacagaaaaaactaactcaaggcgacgaatta
cctcctggtgttcgtaagatggttaaagtgttcttagcagttaaacgtcgtttgcagcct
ggtgacaaaatggcgggacgtcacggaaacaaaggtgttgtttcgaggatattgccagta
gaagatatgcctcatatggctgacggtacacctgcagatatcgttttaaacccactgggc
gtgccatcccgtatgaatgtcggtcaggttcttgaagttcatttaggttgggccgcaaaa
ggtattgggcaacgaatcgccgatatgcttgcagatgaacgtaaaatccaagcatccgaa
attcgtaagtatctagaaaaagtttataaccgtacaggtaaaactgaggatcttaaagaa
tttacagatgagcaaattattgaaatggctcacaatctaaaagatggtattccttttgct
actcctgtttttgatggggcaacagaagaagaaattaacgatatgcttgaacttgcttat
ccagatgacatcaaagagaaacttcatctgacagattctcgtacacaagcttatttaata
gatggtcgtacgggtgagccttttgagagacctgtgactatcggctatatgcactatttg
aaactacaccacttagtggatgataagatgcatgctcgttcaacaggttcttactcactt
gttacacaacagccattgggtggtaaagctcaatttggtggtcaacgtttcggtgagatg
gaggtgtgggcacttgaagcatatggtgcagcattcacattgcaagagatgttgacagaa
aaatctgacgatatggaaggacgcaacaacgtaaatcgtaatattatccaaggcgatcac
gtaattgatgcgggtatgccagagtcgttcaatgtaattgttaaagagatcaggtcactt
ggtctcgacatggagttggagggtaaacagtaa
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